RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 CCDC148Q8NFR7 591 aa26.6■■□□□ 1.85
CHFR-222ENST00000544093 C16orf70Q9BSU1 422 aa26.6■■□□□ 1.85
CHFR-222ENST00000544093 ANO3Q9BYT9 981 aa26.6■■□□□ 1.85
CHFR-222ENST00000544093 WNT8AQ9H1J5 351 aa26.6■■□□□ 1.85
CHFR-222ENST00000544093 UMODL1Q5DID0 1318 aa26.6■■□□□ 1.85
CHFR-222ENST00000544093 DOCK5Q9H7D0 1870 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 H3BRB1 525 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 CPLX1O14810 134 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 SORBS3O60504 671 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 CLK2P49760 499 aaKnown RBP26.59■■□□□ 1.85
CHFR-222ENST00000544093 CCL23P55773 120 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 BICD2Q8TD16 824 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 PHKBQ93100 1093 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 GPR20Q99678 358 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 ALG1Q9BT22 464 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 TUT1Q9H6E5 874 aaKnown RBP26.59■■□□□ 1.85
CHFR-222ENST00000544093 HDAC6Q9UBN7 1215 aa26.59■■□□□ 1.85
CHFR-222ENST00000544093 ZNF215Q9UL58 517 aaPredicted RBP26.59■■□□□ 1.85
CHFR-222ENST00000544093 TANC1Q9C0D5 1861 aa26.58■■□□□ 1.85
CHFR-222ENST00000544093 LGALS2P05162 132 aa26.58■■□□□ 1.85
CHFR-222ENST00000544093 SREBF1P36956 1147 aa26.58■■□□□ 1.85
CHFR-222ENST00000544093 CCT2P78371 535 aaKnown RBP26.58■■□□□ 1.85
CHFR-222ENST00000544093 PKN1Q16512 942 aa26.58■■□□□ 1.85
CHFR-222ENST00000544093 GDF6Q6KF10 455 aaPredicted RBP26.58■■□□□ 1.85
CHFR-222ENST00000544093 C16orf59Q7L2K0 433 aa26.58■■□□□ 1.85
CHFR-222ENST00000544093 SLC26A6Q9BXS9 759 aa26.58■■□□□ 1.85
CHFR-222ENST00000544093 FGBP02675 491 aa26.57■■□□□ 1.84
CHFR-222ENST00000544093 KCNA2P16389 499 aa26.57■■□□□ 1.84
CHFR-222ENST00000544093 ANKRD1Q15327 319 aa26.57■■□□□ 1.84
CHFR-222ENST00000544093 ZNF365Q70YC5 407 aa26.57■■□□□ 1.84
CHFR-222ENST00000544093 REXO1Q8N1G1 1221 aaKnown RBP26.57■■□□□ 1.84
CHFR-222ENST00000544093 DEFB123Q8N688 67 aa26.57■■□□□ 1.84
CHFR-222ENST00000544093 MXRA8Q9BRK3 442 aa26.57■■□□□ 1.84
CHFR-222ENST00000544093 SH3GLB2Q9NR46 395 aa26.57■■□□□ 1.84
CHFR-222ENST00000544093 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.56■■□□□ 1.84
CHFR-222ENST00000544093 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.56■■□□□ 1.84
CHFR-222ENST00000544093 PARNO95453 639 aaKnown RBP26.56■■□□□ 1.84
CHFR-222ENST00000544093 ACRP10323 421 aa26.56■■□□□ 1.84
CHFR-222ENST00000544093 RBL2Q08999 1139 aa26.56■■□□□ 1.84
CHFR-222ENST00000544093 CEP55Q53EZ4 464 aa26.56■■□□□ 1.84
CHFR-222ENST00000544093 RASIP1Q5U651 963 aa26.56■■□□□ 1.84
CHFR-222ENST00000544093 FAM177A1Q8N128 213 aaPredicted RBP26.56■■□□□ 1.84
CHFR-222ENST00000544093 AFAP1L1Q8TED9 768 aa26.56■■□□□ 1.84
CHFR-222ENST00000544093 HERVK_113Q902F9 699 aa26.56■■□□□ 1.84
CHFR-222ENST00000544093 IL17RAQ96F46 866 aa26.56■■□□□ 1.84
CHFR-222ENST00000544093 NCOA5Q9HCD5 579 aaKnown RBP26.56■■□□□ 1.84
CHFR-222ENST00000544093 SSRP1Q08945 709 aaKnown RBP26.55■■□□□ 1.84
CHFR-222ENST00000544093 PTK7Q13308 1070 aa26.55■■□□□ 1.84
CHFR-222ENST00000544093 NIPA1Q7RTP0 329 aa26.55■■□□□ 1.84
CHFR-222ENST00000544093 PPP1R13LQ8WUF5 828 aa26.55■■□□□ 1.84
CHFR-222ENST00000544093 BCAS3Q9H6U6 928 aa26.55■■□□□ 1.84
CHFR-222ENST00000544093 ATP9AO75110 1047 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 CDKL5O76039 1030 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 IQCF3P0C7M6 154 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 ARHGAP4P98171 946 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 ZNF697Q5TEC3 545 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 SEPT1Q8WYJ6 367 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 SCLYQ96I15 445 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 KCNH7Q9NS40 1196 aa26.54■■□□□ 1.84
CHFR-222ENST00000544093 TRIP12Q14669 1992 aaPredicted RBP26.54■■□□□ 1.84
CHFR-222ENST00000544093 TMEM265A0A087WTH1 108 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 DEXIO95424 95 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 GNAT1P11488 350 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 ACTN1P12814 892 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 ZNF76P36508 570 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 PGBD1Q96JS3 809 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 CTAGE1Q96RT6 745 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 SDF4Q9BRK5 362 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 JPH1Q9HDC5 661 aaPredicted RBP26.53■■□□□ 1.84
CHFR-222ENST00000544093 TMEM260Q9NX78 707 aa26.53■■□□□ 1.84
CHFR-222ENST00000544093 C17orf102A2RUQ5 167 aa26.52■■□□□ 1.84
CHFR-222ENST00000544093 MEIS1O00470 390 aa26.52■■□□□ 1.84
CHFR-222ENST00000544093 NFASCO94856 1347 aa26.52■■□□□ 1.84
CHFR-222ENST00000544093 CYP3A4P08684 503 aa26.52■■□□□ 1.84
CHFR-222ENST00000544093 SP4Q02446 784 aa26.52■■□□□ 1.84
CHFR-222ENST00000544093 JAKMIP3Q5VZ66 844 aa26.52■■□□□ 1.84
CHFR-222ENST00000544093 SELPP16109 830 aa26.51■■□□□ 1.83
CHFR-222ENST00000544093 HOXC8P31273 242 aa26.51■■□□□ 1.83
CHFR-222ENST00000544093 TCF7P36402 384 aaPredicted RBP26.51■■□□□ 1.83
CHFR-222ENST00000544093 SLKQ9H2G2 1235 aaPredicted RBP26.51■■□□□ 1.83
CHFR-222ENST00000544093 KAT6AQ92794 2004 aa26.51■■□□□ 1.83
CHFR-222ENST00000544093 SCN5AQ14524 2016 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 SMIM10L2AP0DMW4 78 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 SMIM10L2BP0DMW5 78 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 STK3Q13188 491 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 UTP14CQ5TAP6 766 aaKnown RBP26.5■■□□□ 1.83
CHFR-222ENST00000544093 LRRC8DQ7L1W4 858 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 SERINC5Q86VE9 423 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 CRYGNQ8WXF5 182 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 C22orf23Q9BZE7 217 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 MTMR10Q9NXD2 777 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 ERAP1Q9NZ08 941 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 VPS54Q9P1Q0 977 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 SLC9A2Q9UBY0 812 aa26.5■■□□□ 1.83
CHFR-222ENST00000544093 SETQ01105 290 aaPredicted RBP26.49■■□□□ 1.83
CHFR-222ENST00000544093 GALNT17Q6IS24 598 aa26.49■■□□□ 1.83
CHFR-222ENST00000544093 Q7L0L9 218 aa26.49■■□□□ 1.83
CHFR-222ENST00000544093 OTOP2Q7RTS6 562 aa26.49■■□□□ 1.83
CHFR-222ENST00000544093 DEFB128Q7Z7B8 93 aa26.49■■□□□ 1.83
CHFR-222ENST00000544093 CYP2W1Q8TAV3 490 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms