RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 SP4Q02446 784 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 BLIDQ8IZY5 108 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 GDF15Q99988 308 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 ALG1Q9BT22 464 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 PHF20Q9BVI0 1012 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 SEZ6LQ9BYH1 1024 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 TRPV6Q9H1D0 765 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 TMEM39AQ9NV64 488 aa24.84■■□□□ 1.57
OTUB1-212ENST00000543988 RANBP2P49792 3224 aaKnown RBP24.83■■□□□ 1.57
OTUB1-212ENST00000543988 MEIS1O00470 390 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 NOP56O00567 594 aaKnown RBP24.83■■□□□ 1.57
OTUB1-212ENST00000543988 PPFIA4O75335 1185 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 F2P00734 622 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 CD4P01730 458 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 ARP10275 920 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 ITGB8P26012 769 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 ZNF76P36508 570 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 MDM2Q00987 491 aaPredicted RBP24.83■■□□□ 1.57
OTUB1-212ENST00000543988 FAM47CQ5HY64 1035 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 GALNT17Q6IS24 598 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 GIMAP8Q8ND71 665 aaPredicted RBP24.83■■□□□ 1.57
OTUB1-212ENST00000543988 WASF1Q92558 559 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 GPR20Q99678 358 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 SCN10AQ9Y5Y9 1956 aa24.83■■□□□ 1.57
OTUB1-212ENST00000543988 IGLV3-22A0A075B6J6 115 aa24.82■■□□□ 1.56
OTUB1-212ENST00000543988 M0R2N6 131 aa24.82■■□□□ 1.56
OTUB1-212ENST00000543988 TLR3O15455 904 aaKnown RBP24.82■■□□□ 1.56
OTUB1-212ENST00000543988 MAFGO15525 162 aa24.82■■□□□ 1.56
OTUB1-212ENST00000543988 B4GALT4O60513 344 aa24.82■■□□□ 1.56
OTUB1-212ENST00000543988 NFRKBQ6P4R8 1299 aa24.82■■□□□ 1.56
OTUB1-212ENST00000543988 NIPA1Q7RTP0 329 aa24.82■■□□□ 1.56
OTUB1-212ENST00000543988 ZSCAN31Q96LW9 406 aaPredicted RBP24.82■■□□□ 1.56
OTUB1-212ENST00000543988 SH2B1Q9NRF2 756 aaPredicted RBP24.82■■□□□ 1.56
OTUB1-212ENST00000543988 ST18O60284 1047 aa24.81■■□□□ 1.56
OTUB1-212ENST00000543988 LGALS2P05162 132 aa24.81■■□□□ 1.56
OTUB1-212ENST00000543988 XBP1P17861 261 aa24.81■■□□□ 1.56
OTUB1-212ENST00000543988 PSEN2P49810 448 aa24.81■■□□□ 1.56
OTUB1-212ENST00000543988 ITGB3BPQ13352 177 aaPredicted RBP24.81■■□□□ 1.56
OTUB1-212ENST00000543988 MFSD10Q14728 455 aa24.81■■□□□ 1.56
OTUB1-212ENST00000543988 LBHD1Q9BQE6 289 aaPredicted RBP24.81■■□□□ 1.56
OTUB1-212ENST00000543988 C16orf70Q9BSU1 422 aa24.81■■□□□ 1.56
OTUB1-212ENST00000543988 AGO4Q9HCK5 861 aaKnown RBP24.81■■□□□ 1.56
OTUB1-212ENST00000543988 TRMT13Q9NUP7 481 aaKnown RBP24.81■■□□□ 1.56
OTUB1-212ENST00000543988 EDIL3O43854 480 aa24.8■■□□□ 1.56
OTUB1-212ENST00000543988 CD2BP2O95400 341 aaKnown RBP24.8■■□□□ 1.56
OTUB1-212ENST00000543988 PLA2G4DQ86XP0 818 aa24.8■■□□□ 1.56
OTUB1-212ENST00000543988 TRIM50Q86XT4 487 aa24.8■■□□□ 1.56
OTUB1-212ENST00000543988 HAS3O00219 553 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 RAG1P15918 1043 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 CIITAP33076 1130 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 FOSBP53539 338 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 KIAA0753Q2KHM9 967 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 OXER1Q8TDS5 423 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 TBCKQ8TEA7 893 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 BADQ92934 168 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 LLPHQ9BRT6 129 aaKnown RBP24.79■■□□□ 1.56
OTUB1-212ENST00000543988 KATNAL1Q9BW62 490 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 JPH1Q9HDC5 661 aaPredicted RBP24.79■■□□□ 1.56
OTUB1-212ENST00000543988 LTBP2Q14767 1821 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 TRIOBPQ9H2D6 2365 aa24.79■■□□□ 1.56
OTUB1-212ENST00000543988 PTPN11Q06124 597 aaPredicted RBP24.78■■□□□ 1.56
OTUB1-212ENST00000543988 KRT25Q7Z3Z0 450 aa24.78■■□□□ 1.56
OTUB1-212ENST00000543988 SESTD1Q86VW0 696 aa24.78■■□□□ 1.56
OTUB1-212ENST00000543988 LENG9Q96B70 501 aa24.78■■□□□ 1.56
OTUB1-212ENST00000543988 UIMC1Q96RL1 719 aa24.78■■□□□ 1.56
OTUB1-212ENST00000543988 SDF4Q9BRK5 362 aa24.78■■□□□ 1.56
OTUB1-212ENST00000543988 NFASCO94856 1347 aa24.78■■□□□ 1.56
OTUB1-212ENST00000543988 SETQ01105 290 aaPredicted RBP24.77■■□□□ 1.56
OTUB1-212ENST00000543988 PRR16Q569H4 304 aa24.77■■□□□ 1.56
OTUB1-212ENST00000543988 UTP14CQ5TAP6 766 aaKnown RBP24.77■■□□□ 1.56
OTUB1-212ENST00000543988 PPP1R12CQ9BZL4 782 aa24.77■■□□□ 1.56
OTUB1-212ENST00000543988 UBE2OQ9C0C9 1292 aaKnown RBP24.77■■□□□ 1.56
OTUB1-212ENST00000543988 SLC9A2Q9UBY0 812 aa24.77■■□□□ 1.56
OTUB1-212ENST00000543988 GSTTP1A0A1W2PQM5 241 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 TIMP1P01033 207 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 CYP2C9P11712 490 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 BMP8BP34820 402 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 TCF7P36402 384 aaPredicted RBP24.76■■□□□ 1.55
OTUB1-212ENST00000543988 USP11P51784 963 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 NONOQ15233 471 aaKnown RBP eCLIP24.76■■□□□ 1.55
OTUB1-212ENST00000543988 GDF6Q6KF10 455 aaPredicted RBP24.76■■□□□ 1.55
OTUB1-212ENST00000543988 C7orf31Q8N865 590 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 NOC4LQ9BVI4 516 aaKnown RBP24.76■■□□□ 1.55
OTUB1-212ENST00000543988 HIPK3Q9H422 1215 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 HDAC6Q9UBN7 1215 aa24.76■■□□□ 1.55
OTUB1-212ENST00000543988 H3BRB1 525 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 IPO5O00410 1097 aaKnown RBP24.75■■□□□ 1.55
OTUB1-212ENST00000543988 SUPT20HL2P0C7V6 817 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 INF2Q27J81 1249 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 HABP4Q5JVS0 413 aaKnown RBP24.75■■□□□ 1.55
OTUB1-212ENST00000543988 IL27Q8NEV9 243 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 SEPT1Q8WYJ6 367 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 CTAGE1Q96RT6 745 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 ZNF577Q9BSK1 485 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 TUT1Q9H6E5 874 aaKnown RBP24.75■■□□□ 1.55
OTUB1-212ENST00000543988 GTF2IRD1Q9UHL9 959 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 UMODL1Q5DID0 1318 aa24.75■■□□□ 1.55
OTUB1-212ENST00000543988 CCDC194A0A1B0GVG4 234 aa24.74■■□□□ 1.55
OTUB1-212ENST00000543988 DDX39AO00148 427 aaKnown RBP24.74■■□□□ 1.55
OTUB1-212ENST00000543988 TDP2O95551 362 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms