RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ADGRG1Q9Y653 693 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 TTC26A0AVF1 554 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 RNF225M0QZC1 329 aaPredicted RBP18.95■□□□□ 0.62
PTPRO-209ENST00000543886 KIF20AO95235 890 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 R3HDM1Q15032 1099 aaKnown RBP18.95■□□□□ 0.62
PTPRO-209ENST00000543886 SYCP1Q15431 976 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 HERC4Q5GLZ8 1057 aaPredicted RBP18.95■□□□□ 0.62
PTPRO-209ENST00000543886 MIIPQ5JXC2 388 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 PRPF38AQ8NAV1 312 aaKnown RBP18.95■□□□□ 0.62
PTPRO-209ENST00000543886 GLIS3Q8NEA6 775 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 WDR18Q9BV38 432 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 KIAA1683Q9H0B3 1180 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 TBC1D7Q9P0N9 293 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 HACL1Q9UJ83 578 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 CAPN11Q9UMQ6 739 aa18.95■□□□□ 0.62
PTPRO-209ENST00000543886 TRIM21P19474 475 aaKnown RBP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 GNG11P61952 73 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 UBXN2AP68543 259 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 CYP4A11Q02928 519 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 RAD51AP2Q09MP3 1159 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 PABPC4Q13310 644 aaKnown RBP eCLIP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 KIF4BQ2VIQ3 1234 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 LRCH2Q5VUJ6 765 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 RETREG2Q8NC44 543 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 OR8K1Q8NGG5 319 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 POLR3CQ9BUI4 534 aaPredicted RBP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 ZHX3Q9H4I2 956 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 ASTN2O75129 1339 aaPredicted RBP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 FZD9O00144 591 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 SLU7O95391 586 aaKnown RBP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 ERVK-24P63145 666 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 SYT2Q8N9I0 419 aaPredicted RBP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 HOOK2Q96ED9 719 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 EIF2AK1Q9BQI3 630 aaKnown RBP18.94■□□□□ 0.62
PTPRO-209ENST00000543886 DEFB129Q9H1M3 183 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 L2HGDHQ9H9P8 463 aa18.94■□□□□ 0.62
PTPRO-209ENST00000543886 PSMC6P62333 389 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 SETQ01105 290 aaPredicted RBP18.93■□□□□ 0.62
PTPRO-209ENST00000543886 MAN2A1Q16706 1144 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 VWA3BQ502W6 1294 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 CEP55Q53EZ4 464 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 ARSHQ5FYA8 562 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 LRRC55Q6ZSA7 311 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 ZNF710Q8N1W2 664 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 KCTD17Q8N5Z5 321 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 DNAJC7Q99615 494 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 TANGO6Q9C0B7 1094 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 MRPL44Q9H9J2 332 aaKnown RBP18.93■□□□□ 0.62
PTPRO-209ENST00000543886 ZNF215Q9UL58 517 aaPredicted RBP18.93■□□□□ 0.62
PTPRO-209ENST00000543886 RABGAP1Q9Y3P9 1069 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 FRMD3A2A2Y4 597 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 GAS7O60861 476 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 CASQ1P31415 396 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 SLC5A5Q92911 643 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 ERO1AQ96HE7 468 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 ERGIC2Q96RQ1 377 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 PCDHA2Q9Y5H9 948 aa18.93■□□□□ 0.62
PTPRO-209ENST00000543886 EML1O00423 815 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 HSD17B4P51659 736 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 FKBP3Q00688 224 aaKnown RBP18.92■□□□□ 0.62
PTPRO-209ENST00000543886 PPP2R5CQ13362 524 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 ZCWPW2Q504Y3 356 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 DCAF15Q66K64 600 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 OTOP1Q7RTM1 612 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 IQCDQ96DY2 449 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 LZTFL1Q9NQ48 299 aa18.92■□□□□ 0.62
PTPRO-209ENST00000543886 ZNF536O15090 1300 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 TRAF5O00463 557 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 CHMP2AO43633 222 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 PSMD10O75832 226 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 NCBP1Q09161 790 aaKnown RBP18.91■□□□□ 0.62
PTPRO-209ENST00000543886 GIT2Q14161 759 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 MCF2L2Q86YR7 1114 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 NELFCDQ8IXH7 590 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 ZNF577Q9BSK1 485 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 FGFBP2Q9BYJ0 223 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 BHMT2Q9H2M3 363 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 NDST4Q9H3R1 872 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 TUFT1Q9NNX1 390 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 EMILIN3Q9NT22 766 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 DOCK1Q14185 1865 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 EYA4O95677 639 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 KLK7P49862 253 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 PRELPP51888 382 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 MTMR2Q13614 643 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 NBPF12Q5TAG4 269 aaPredicted RBP18.91■□□□□ 0.62
PTPRO-209ENST00000543886 ANKRD7Q92527 254 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 SGIP1Q9BQI5 828 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 REEP2Q9BRK0 252 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 WDR11Q9BZH6 1224 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 TTYH3Q9C0H2 523 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 ZNHIT6Q9NWK9 470 aaKnown RBP18.91■□□□□ 0.62
PTPRO-209ENST00000543886 RGL1Q9NZL6 768 aa18.91■□□□□ 0.62
PTPRO-209ENST00000543886 CTDP1Q9Y5B0 961 aaPredicted RBP18.91■□□□□ 0.62
PTPRO-209ENST00000543886 FLOT1O75955 427 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 URI1O94763 535 aaPredicted RBP18.9■□□□□ 0.62
PTPRO-209ENST00000543886 CCDC40Q4G0X9 1142 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 KRT26Q7Z3Y9 468 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms