RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 XRCC6P12956 609 aaKnown RBP eCLIP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 NSFP46459 744 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 IRX5P78411 483 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 MXRA7P84157 204 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 RPS6KA1Q15418 735 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 CLUL1Q15846 466 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 EXOC3L4Q17RC7 722 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 C8orf74Q6P047 294 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 TSHZ1Q6ZSZ6 1077 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 TMTC3Q6ZXV5 915 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 OR8K1Q8NGG5 319 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 CCT6BQ92526 530 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 GSDMAQ96QA5 445 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 SELENOSQ9BQE4 189 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 MED14O60244 1454 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 SETBP1Q9Y6X0 1596 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PLEKHA8P1O95397 391 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PSMC2P35998 433 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 OSTNP61366 133 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 MYL7Q01449 175 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 CACNB1Q02641 598 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 MYO1EQ12965 1108 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PLA2G12BQ9BX93 195 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 IMPACTQ9P2X3 320 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 WDR64B1ANS9 1081 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 ALDH3A1P30838 453 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 GMPSP49915 693 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 FOXO4P98177 505 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 CFAP157Q5JU67 520 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 FAM186BQ8IYM0 893 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 C7orf31Q8N865 590 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 TBC1D22BQ9NU19 505 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 FEZ2Q9UHY8 353 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PCDHA6Q9UN73 950 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 UTP11Q9Y3A2 253 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PCDHA8Q9Y5H6 950 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 DLC1Q96QB1 1528 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PNPLA6Q8IY17 1366 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 A0A1W2PQ27 194 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 A0A1W2PQ64 194 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 A0A1W2PQD8 194 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 CRCPO75575 148 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 RPS12P25398 132 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 MFAP3P55082 362 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 POLR2FP61218 127 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 PPANQ9NQ55 473 aaKnown RBP7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
SRGAP1-206ENST00000543397 ABCA6Q8N139 1617 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 QRICH2Q9H0J4 1663 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 NCOA3Q9Y6Q9 1424 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SYNJ2BP-COX16A0A087WUM0 186 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 NDUFA8P51970 172 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 MARSP56192 900 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 ITIH3Q06033 890 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SNAPC2Q13487 334 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 BSPRYQ5W0U4 402 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 ZBTB33Q86T24 672 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 DAAM2Q86T65 1068 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 CCDC105Q8IYK2 499 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 FBF1Q8TES7 1133 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 EEF2KMTQ96G04 330 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 RPAP3Q9H6T3 665 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 KCNK9Q9NPC2 374 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 RAB20Q9NX57 234 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 COX16Q9P0S2 106 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 TSKSQ9UJT2 592 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 PPRC1Q5VV67 1664 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 E9PCH4 1651 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 FAM170AA1A519 330 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 ASB14A6NK59 587 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 ZNF75DP51815 510 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 KRT76Q01546 638 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SEMA3FQ13275 785 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SURF1Q15526 300 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 NBPF20Q3BBV1 942 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 ARFGAP2Q8N6H7 521 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 MCPH1Q8NEM0 835 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 UBLCP1Q8WVY7 318 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 CCDC51Q96ER9 411 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 PARK7Q99497 189 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 RSPH9Q9H1X1 276 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 BHMT2Q9H2M3 363 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 VRTNQ9H8Y1 702 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SH3GLB2Q9NR46 395 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 NXF1Q9UBU9 619 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 PCDHB4Q9Y5E5 795 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SPDYE16A6NNV3 312 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 IVLP07476 585 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 ZBTB17Q13105 803 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 CTTNQ14247 550 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SPDYE2Q495Y8 402 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 SMC1BQ8NDV3 1235 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 HAUS1Q96CS2 278 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 GCNAQ96QF7 691 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 TRIM7Q9C029 511 aa7.51□□□□□ -1.21
SRGAP1-206ENST00000543397 RPF1Q9H9Y2 349 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms