RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 ODF2Q5BJF6 829 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 CFAP58Q5T655 872 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 LMNTD2Q8IXW0 634 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 STAG2Q8N3U4 1231 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 VAT1LQ9HCJ6 419 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 MAN1B1Q9UKM7 699 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 STK38LQ9Y2H1 464 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 NFE2L3Q9Y4A8 694 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 A0A087X0B3 334 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 CYP11B2P19099 503 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 DTNBP1Q96EV8 351 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 SEC16BQ96JE7 1060 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 ZIM3Q96PE6 472 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 RNF26Q9BY78 433 aaPredicted RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 PPP1R12CQ9BZL4 782 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 HSD3B7Q9H2F3 369 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 SAMSN1Q9NSI8 373 aaKnown RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 PANK4Q9NVE7 773 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 A6NHS1 94 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 DYNC1I2Q13409 638 aaKnown RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 FAM133BQ5BKY9 247 aaKnown RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 ANKRD20A2Q5SQ80 823 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 ANKRD20A1Q5TYW2 823 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 ANKRD20A3Q5VUR7 823 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 C6orf89Q6UWU4 347 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 SPICE1Q8N0Z3 855 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 WHAMMQ8TF30 809 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
CDH4-201ENST00000543233 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 BRIP1Q9BX63 1249 aa12.36□□□□□ -0.43
CDH4-201ENST00000543233 LIN7AO14910 233 aaPredicted RBP12.35□□□□□ -0.43
CDH4-201ENST00000543233 PTGDRQ13258 359 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 QPCTQ16769 361 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 KBTBD12Q3ZCT8 623 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 TCERG1LQ5VWI1 586 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 OLFML1Q6UWY5 402 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 KDM7AQ6ZMT4 941 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 PAGR1Q9BTK6 254 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 ANKRD2Q9GZV1 360 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 TUBE1Q9UJT0 475 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
CDH4-201ENST00000543233 SAR1BQ9Y6B6 198 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.35□□□□□ -0.43
CDH4-201ENST00000543233 UFL1O94874 794 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 TUBP50607 506 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 CKAP4Q07065 602 aaKnown RBP12.35□□□□□ -0.43
CDH4-201ENST00000543233 CEP128Q6ZU80 1094 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 TMTC3Q6ZXV5 915 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 SPATA7Q9P0W8 599 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 TRIM10Q9UDY6 481 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 LEMD3Q9Y2U8 911 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 RNF220Q5VTB9 566 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 LONP2Q86WA8 852 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 ERICH1Q86X53 443 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 ZFAND2BQ8WV99 257 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 RPGRQ92834 1020 aaKnown RBP12.35□□□□□ -0.43
CDH4-201ENST00000543233 FGD4Q96M96 766 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 JADE2Q9NQC1 790 aa12.35□□□□□ -0.43
CDH4-201ENST00000543233 GMNCA6NCL1 334 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 C6orf229H3BNL8 230 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 TSPY3P0CV98 308 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 TSPY8P0CW00 308 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 FUT4P22083 530 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 PLCD1P51178 756 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 EZH2Q15910 746 aaKnown RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 CCDC38Q502W7 563 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 CRELD2Q6UXH1 353 aaPredicted RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 NAF1Q96HR8 494 aaKnown RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 TARSL2A2RTX5 802 aaKnown RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 TM4SF1P30408 202 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 RBL2Q08999 1139 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 FUT2Q10981 343 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 VPS72Q15906 364 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 HEATR3Q7Z4Q2 680 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 CCDC155Q8N6L0 562 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 OPTNQ96CV9 577 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 EEF2KMTQ96G04 330 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 ZNHIT6Q9NWK9 470 aaKnown RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 CEP131Q9UPN4 1083 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 SRPRBQ9Y5M8 271 aaKnown RBP12.34□□□□□ -0.43
CDH4-201ENST00000543233 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
CDH4-201ENST00000543233 C4AP0C0L4 1744 aa12.33□□□□□ -0.43
CDH4-201ENST00000543233 C4BP0C0L5 1744 aa12.33□□□□□ -0.43
CDH4-201ENST00000543233 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 ZNF185O15231 689 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms