RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 TROAPQ12815 778 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 PUM3Q15397 648 aaKnown RBP10.67□□□□□ -0.7
TCF4-208ENST00000543082 SPDYCQ5MJ68 293 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 HGSNATQ68CP4 663 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 CAPRIN2Q6IMN6 1127 aaKnown RBP10.67□□□□□ -0.7
TCF4-208ENST00000543082 TCP11Q8WWU5 503 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 TLCD1Q96CP7 247 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 FAM89AQ96GI7 184 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 L3MBTL3Q96JM7 780 aaPredicted RBP10.67□□□□□ -0.7
TCF4-208ENST00000543082 PBKQ96KB5 322 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 ORAI2Q96SN7 254 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 SLC39A2Q9NP94 309 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 KIF13BQ9NQT8 1826 aa10.67□□□□□ -0.7
TCF4-208ENST00000543082 BAZ2BQ9UIF8 2168 aaKnown RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 LAD1O00515 517 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 SKAP2O75563 359 aaPredicted RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 ALADP13716 330 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 EHHADHQ08426 723 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 PFKFB3Q16875 520 aaPredicted RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 RNF217Q8TC41 542 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 THOC1Q96FV9 657 aaKnown RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 C7orf25Q9BPX7 421 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 TRIM9Q9C026 710 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 BAZ2AQ9UIF9 1905 aaKnown RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 AFF2P51816 1311 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 PP2D1A8MPX8 630 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 CTNND1O60716 968 aaKnown RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 ZPR1O75312 459 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 SMNDC1O75940 238 aaKnown RBP eCLIP10.66□□□□□ -0.7
TCF4-208ENST00000543082 CLTAP09496 248 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 STK4Q13043 487 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 ZNF268Q14587 947 aaPredicted RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 RPS6KA1Q15418 735 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 SFMBT2Q5VUG0 894 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 CENPPQ6IPU0 288 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 TMC4Q7Z404 712 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 PNMA8AQ86V59 439 aaPredicted RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 HOOK3Q86VS8 718 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 BLIDQ8IZY5 108 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 ACTRT1Q8TDG2 376 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 SCFD2Q8WU76 684 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 ACSBG1Q96GR2 724 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 MOV10L1Q9BXT6 1211 aaKnown RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 GREM2Q9H772 168 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 KIF9Q9HAQ2 790 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 SAMD15Q9P1V8 674 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 CEP72Q9P209 647 aa10.66□□□□□ -0.7
TCF4-208ENST00000543082 CORO1CQ9ULV4 474 aaPredicted RBP10.66□□□□□ -0.7
TCF4-208ENST00000543082 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 ANKRD33BA6NCL7 494 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 BTNL10A8MVZ5 291 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 F8VZ95 297 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 CCDC188H7C350 402 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 LUC7L3O95232 432 aaKnown RBP10.65□□□□□ -0.7
TCF4-208ENST00000543082 SLC5A1P13866 664 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 PRPHP41219 470 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 CTSWP56202 376 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 ZC3H6P61129 1189 aaKnown RBP10.65□□□□□ -0.7
TCF4-208ENST00000543082 AMPD3Q01432 767 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 RASGRF1Q13972 1273 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 KRT28Q7Z3Y7 464 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 TMC3Q7Z5M5 1100 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 CNKSR1Q969H4 720 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 AK8Q96MA6 479 aa10.65□□□□□ -0.7
TCF4-208ENST00000543082 ZNF317Q96PQ6 595 aaPredicted RBP10.65□□□□□ -0.7
TCF4-208ENST00000543082 NSRP1Q9H0G5 558 aaKnown RBP10.65□□□□□ -0.7
TCF4-208ENST00000543082 PGRMC1O00264 195 aaKnown RBP10.65□□□□□ -0.71
TCF4-208ENST00000543082 KCNK3O14649 394 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 PCP11498 1178 aaKnown RBP10.65□□□□□ -0.71
TCF4-208ENST00000543082 PLCG1P19174 1290 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 FGFR2P21802 821 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 CCND1P24385 295 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 KLRC1P26715 233 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 INHBEP58166 350 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 RNASE9P60153 205 aaKnown RBP10.65□□□□□ -0.71
TCF4-208ENST00000543082 IFI16Q16666 785 aaKnown RBP10.65□□□□□ -0.71
TCF4-208ENST00000543082 MIS18BP1Q6P0N0 1132 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 PIGWQ7Z7B1 504 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 SRBD1Q8N5C6 995 aaKnown RBP10.65□□□□□ -0.71
TCF4-208ENST00000543082 PLIN2Q99541 437 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 NEUROG2Q9H2A3 272 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 SLITRK6Q9H5Y7 841 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 FAM114A2Q9NRY5 505 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 ATP6V0A2Q9Y487 856 aa10.65□□□□□ -0.71
TCF4-208ENST00000543082 TNS2Q63HR2 1409 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 LAMB1P07942 1786 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 FLT1P17948 1338 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 MROH5Q6ZUA9 1318 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 C1orf167Q5SNV9 1468 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
TCF4-208ENST00000543082 SART1O43290 800 aaKnown RBP10.64□□□□□ -0.71
TCF4-208ENST00000543082 KIF4AO95239 1232 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 MMEP08473 750 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 FCER1AP12319 257 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
TCF4-208ENST00000543082 USP11P51784 963 aa10.64□□□□□ -0.71
TCF4-208ENST00000543082 RWDD2BP57060 319 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms