RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 DDX20Q9UHI6 824 aaKnown RBP23.54■■□□□ 1.36
OTUB1-211ENST00000543004 DYNC1LI2O43237 492 aaPredicted RBP23.53■■□□□ 1.36
OTUB1-211ENST00000543004 TXKP42681 527 aa23.53■■□□□ 1.36
OTUB1-211ENST00000543004 PTPAQ15257 358 aa23.53■■□□□ 1.36
OTUB1-211ENST00000543004 CELF3Q5SZQ8 465 aaKnown RBP23.53■■□□□ 1.36
OTUB1-211ENST00000543004 LHX8Q68G74 356 aa23.53■■□□□ 1.36
OTUB1-211ENST00000543004 SENP7Q9BQF6 1050 aa23.53■■□□□ 1.36
OTUB1-211ENST00000543004 FARP2O94887 1054 aaPredicted RBP23.52■■□□□ 1.36
OTUB1-211ENST00000543004 LRCH2Q5VUJ6 765 aa23.52■■□□□ 1.36
OTUB1-211ENST00000543004 TLK2Q86UE8 772 aa23.52■■□□□ 1.36
OTUB1-211ENST00000543004 DHX37Q8IY37 1157 aaKnown RBP23.52■■□□□ 1.36
OTUB1-211ENST00000543004 ZNF396Q96N95 335 aaPredicted RBP23.52■■□□□ 1.36
OTUB1-211ENST00000543004 PAK6Q9NQU5 681 aaPredicted RBP23.52■■□□□ 1.36
OTUB1-211ENST00000543004 MARCH6O60337 910 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 PSMD10O75832 226 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 PGK1P00558 417 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 OR52Z1P0C646 297 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 ATP2C1P98194 919 aaPredicted RBP23.51■■□□□ 1.35
OTUB1-211ENST00000543004 ORC2Q13416 577 aaPredicted RBP23.51■■□□□ 1.35
OTUB1-211ENST00000543004 NEDD9Q14511 834 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 IL17AQ16552 155 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 HSDL1Q3SXM5 330 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 OR6J1Q8NGC5 347 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 DEFB118Q96PH6 123 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 MLXIPQ9HAP2 919 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 SYNRGQ9UMZ2 1314 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 DNAH12Q6ZR08 3092 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 MYADML2A6NDP7 307 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 TBX3O15119 743 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 DUSP11O75319 330 aaKnown RBP23.51■■□□□ 1.35
OTUB1-211ENST00000543004 CCNE2O96020 404 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 GH1P01241 217 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 RARBP10826 455 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 TNPO1Q92973 898 aaKnown RBP23.51■■□□□ 1.35
OTUB1-211ENST00000543004 FAM20AQ96MK3 541 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 SDF4Q9BRK5 362 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 POLR3EQ9NVU0 708 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 VAV3Q9UKW4 847 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 WDR81Q562E7 1941 aa23.51■■□□□ 1.35
OTUB1-211ENST00000543004 CTAGE5O15320 804 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 CHMP2AO43633 222 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 GAS7O60861 476 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 NCLP19338 710 aaKnown RBP23.5■■□□□ 1.35
OTUB1-211ENST00000543004 MARCKSP29966 332 aaPredicted RBP23.5■■□□□ 1.35
OTUB1-211ENST00000543004 NASPP49321 788 aaPredicted RBP23.5■■□□□ 1.35
OTUB1-211ENST00000543004 BEX3Q00994 111 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 METTL7BQ6UX53 244 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 UNC45AQ9H3U1 944 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 TTC12Q9H892 705 aaPredicted RBP23.5■■□□□ 1.35
OTUB1-211ENST00000543004 JPH1Q9HDC5 661 aaPredicted RBP23.5■■□□□ 1.35
OTUB1-211ENST00000543004 XPNPEP3Q9NQH7 507 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 NFASCO94856 1347 aa23.5■■□□□ 1.35
OTUB1-211ENST00000543004 NKRFO15226 690 aaKnown RBP eCLIP23.49■■□□□ 1.35
OTUB1-211ENST00000543004 BAG4O95429 457 aaKnown RBP23.49■■□□□ 1.35
OTUB1-211ENST00000543004 MYCNP04198 464 aaPredicted RBP23.49■■□□□ 1.35
OTUB1-211ENST00000543004 GRIN1Q05586 938 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 LINC00301Q8NCQ3 95 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 AFG1LQ8WV93 481 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 SPATA33Q96N06 139 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 RIT2Q99578 217 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 TEKT3Q9BXF9 490 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 TBC1D22BQ9NU19 505 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 SLC9A2Q9UBY0 812 aa23.49■■□□□ 1.35
OTUB1-211ENST00000543004 TECP42680 631 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 SPIRE1Q08AE8 756 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 SLFN12Q8IYM2 578 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 GDPD2Q9HCC8 539 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 PCDHA12Q9UN75 941 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 ATP6V1DQ9Y5K8 247 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 ADAMTS4O75173 837 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 C6orf222P0C671 652 aaPredicted RBP23.48■■□□□ 1.35
OTUB1-211ENST00000543004 GJA9P57773 515 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 LAMC2Q13753 1193 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 SLC39A14Q15043 492 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 STK38Q15208 465 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 B3GNT9Q6UX72 402 aa23.48■■□□□ 1.35
OTUB1-211ENST00000543004 GIMAP8Q8ND71 665 aaPredicted RBP23.48■■□□□ 1.35
OTUB1-211ENST00000543004 EMID1Q96A84 441 aaPredicted RBP23.48■■□□□ 1.35
OTUB1-211ENST00000543004 KIAA0100Q14667 2235 aaKnown RBP23.47■■□□□ 1.35
OTUB1-211ENST00000543004 POTEMA6NI47 508 aa23.47■■□□□ 1.35
OTUB1-211ENST00000543004 EML1O00423 815 aa23.47■■□□□ 1.35
OTUB1-211ENST00000543004 ACTR2P61160 394 aa23.47■■□□□ 1.35
OTUB1-211ENST00000543004 GPR20Q99678 358 aa23.47■■□□□ 1.35
OTUB1-211ENST00000543004 AP5M1Q9H0R1 490 aa23.47■■□□□ 1.35
OTUB1-211ENST00000543004 UPF3AQ9H1J1 476 aaKnown RBP23.47■■□□□ 1.35
OTUB1-211ENST00000543004 CEP131Q9UPN4 1083 aa23.47■■□□□ 1.35
OTUB1-211ENST00000543004 Q9Y3F1 56 aa23.47■■□□□ 1.35
OTUB1-211ENST00000543004 GSTTP1A0A1W2PQM5 241 aa23.46■■□□□ 1.35
OTUB1-211ENST00000543004 VWA3AA6NCI4 1184 aa23.46■■□□□ 1.35
OTUB1-211ENST00000543004 LAD1O00515 517 aa23.46■■□□□ 1.35
OTUB1-211ENST00000543004 MSCO60682 206 aa23.46■■□□□ 1.35
OTUB1-211ENST00000543004 KRT85P78386 507 aa23.46■■□□□ 1.35
OTUB1-211ENST00000543004 CFAP45Q9UL16 551 aa23.46■■□□□ 1.35
OTUB1-211ENST00000543004 MMP3P08254 477 aa23.45■■□□□ 1.34
OTUB1-211ENST00000543004 PPP2R5CQ13362 524 aa23.45■■□□□ 1.34
OTUB1-211ENST00000543004 ATL3Q6DD88 541 aa23.45■■□□□ 1.34
OTUB1-211ENST00000543004 NCAPH2Q6IBW4 605 aa23.45■■□□□ 1.34
OTUB1-211ENST00000543004 DTHD1Q6ZMT9 781 aa23.45■■□□□ 1.34
OTUB1-211ENST00000543004 PPTC7Q8NI37 304 aa23.45■■□□□ 1.34
OTUB1-211ENST00000543004 CLIC6Q96NY7 704 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms