RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SLC5A4Q9NY91 659 aa14.2□□□□□ -0.14
TNC-212ENST00000542877 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
TNC-212ENST00000542877 LRRN2O75325 713 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 MT-ND3P03897 115 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 SAT1P21673 171 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 DYNLL1P63167 89 aaKnown RBP14.19□□□□□ -0.14
TNC-212ENST00000542877 CYP27A1Q02318 531 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 ITKQ08881 620 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 TRIM56Q9BRZ2 755 aaKnown RBP14.19□□□□□ -0.14
TNC-212ENST00000542877 DIS3Q9Y2L1 958 aaKnown RBP14.19□□□□□ -0.14
TNC-212ENST00000542877 KSR1Q8IVT5 923 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 HDAC11Q96DB2 347 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 CLIC2O15247 247 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 CPP00450 1065 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 KRT1P04264 644 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 SRGAP2BP0DMP2 458 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 FAM133BQ5BKY9 247 aaKnown RBP14.19□□□□□ -0.14
TNC-212ENST00000542877 CSADQ9Y600 493 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 PRKAB2O43741 272 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 OATP04181 439 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 GUCY2CP25092 1073 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 JPH2Q9BR39 696 aaPredicted RBP14.19□□□□□ -0.14
TNC-212ENST00000542877 SAMD9Q5K651 1589 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 TCP10L2B9ZVM9 353 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 STX1BP61266 288 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 PLCB4Q15147 1175 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 DIXDC1Q155Q3 683 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 ANKRD36BP1Q96IX9 119 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 KMT5AQ9NQR1 393 aa14.19□□□□□ -0.14
TNC-212ENST00000542877 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
TNC-212ENST00000542877 SASH1O94885 1247 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 CACNB1Q02641 598 aaPredicted RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 KANSL2Q9H9L4 492 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 UBE2TQ9NPD8 197 aaPredicted RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 PLA2G4BP0C869 781 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 SKIP12755 728 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 TLR3O15455 904 aaKnown RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 CDC25AP30304 524 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 SLCO1A2P46721 670 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 HNRNPH2P55795 449 aaKnown RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 ADCY1Q08828 1119 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 HIBCHQ6NVY1 386 aaPredicted RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 RHOT2Q8IXI1 618 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 DDX17Q92841 729 aaKnown RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 SH3GLB2Q9NR46 395 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 SCOCQ9UIL1 159 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 YEATS2Q9ULM3 1422 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 EXOC1LA0A1B0GW35 172 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 ANO9A1A5B4 782 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 SPECC1L-ADORA2AF8WAN1 911 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 XPOTO43592 962 aaKnown RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 RAPH1Q70E73 1250 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 SLC7A3Q8WY07 619 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 PARVGQ9HBI0 331 aa14.18□□□□□ -0.14
TNC-212ENST00000542877 SEPT9Q9UHD8 586 aaPredicted RBP14.18□□□□□ -0.14
TNC-212ENST00000542877 PPFIA2O75334 1257 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 SLC7A5Q01650 507 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 ALCAMQ13740 583 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 DNAJC24Q6P3W2 148 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 ALKBH5Q6P6C2 394 aaKnown RBP14.17□□□□□ -0.14
TNC-212ENST00000542877 ARHGEF25Q86VW2 580 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 PTPREP23469 700 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 MXI1P50539 228 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 TAF11Q15544 211 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 DOK7Q18PE1 504 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 RAB44Q7Z6P3 723 aaPredicted RBP14.17□□□□□ -0.14
TNC-212ENST00000542877 PAGR1Q9BTK6 254 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 EFHD1Q9BUP0 239 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 DRC3Q9H069 523 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 NFU1Q9UMS0 254 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 SPDL1Q96EA4 605 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 PALM3A6NDB9 673 aaPredicted RBP14.17□□□□□ -0.14
TNC-212ENST00000542877 PODXLO00592 558 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 MED7O43513 233 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 FLAD1Q8NFF5 587 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 OSBPL5Q9H0X9 879 aaPredicted RBP14.17□□□□□ -0.14
TNC-212ENST00000542877 ADAM21Q9UKJ8 722 aa14.17□□□□□ -0.14
TNC-212ENST00000542877 LOC102724428A0A0B4J2F2 783 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 KPNA2P52292 529 aaKnown RBP14.16□□□□□ -0.14
TNC-212ENST00000542877 SIK1P57059 783 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 AIFM3Q96NN9 605 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 NCAPGQ9BPX3 1015 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 ZNF408Q9H9D4 720 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 ANGPTL2Q9UKU9 493 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 IPO5O00410 1097 aaKnown RBP14.16□□□□□ -0.14
TNC-212ENST00000542877 MAGEA9P43362 315 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
TNC-212ENST00000542877 CC2D1AQ6P1N0 951 aaPredicted RBP14.16□□□□□ -0.14
TNC-212ENST00000542877 KCTD1Q719H9 257 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 SPC25Q9HBM1 224 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 MAP3K7O43318 606 aa14.16□□□□□ -0.14
TNC-212ENST00000542877 DNAJC8O75937 253 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms