RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 UBA1P22314 1058 aaKnown RBP26.09■■□□□ 1.77
HOMER3-205ENST00000542541 TMEM266Q2M3C6 531 aa26.09■■□□□ 1.77
HOMER3-205ENST00000542541 SH3TC2Q8TF17 1288 aa26.09■■□□□ 1.77
HOMER3-205ENST00000542541 FERMT2Q96AC1 680 aa26.09■■□□□ 1.77
HOMER3-205ENST00000542541 SPATA32Q96LK8 384 aa26.09■■□□□ 1.77
HOMER3-205ENST00000542541 TEKT3Q9BXF9 490 aa26.09■■□□□ 1.77
HOMER3-205ENST00000542541 TTC12Q9H892 705 aaPredicted RBP26.09■■□□□ 1.77
HOMER3-205ENST00000542541 HMX1Q9NP08 348 aaPredicted RBP26.09■■□□□ 1.77
HOMER3-205ENST00000542541 PPP6R2O75170 966 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 PSMD10O75832 226 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 GH1P01241 217 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 SMPD1P17405 629 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 SP2Q02086 613 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 ITGB3BPQ13352 177 aaPredicted RBP26.08■■□□□ 1.77
HOMER3-205ENST00000542541 DHX37Q8IY37 1157 aaKnown RBP26.08■■□□□ 1.77
HOMER3-205ENST00000542541 UIMC1Q96RL1 719 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 RAB34Q9BZG1 259 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 MLXIPQ9HAP2 919 aa26.08■■□□□ 1.77
HOMER3-205ENST00000542541 DHX15O43143 795 aaKnown RBP26.07■■□□□ 1.76
HOMER3-205ENST00000542541 GGPS1O95749 300 aa26.07■■□□□ 1.76
HOMER3-205ENST00000542541 CSPP1Q1MSJ5 1256 aa26.07■■□□□ 1.76
HOMER3-205ENST00000542541 CELF3Q5SZQ8 465 aaKnown RBP26.07■■□□□ 1.76
HOMER3-205ENST00000542541 METTL7BQ6UX53 244 aa26.07■■□□□ 1.76
HOMER3-205ENST00000542541 CHAMP1Q96JM3 812 aa26.07■■□□□ 1.76
HOMER3-205ENST00000542541 JPH1Q9HDC5 661 aaPredicted RBP26.07■■□□□ 1.76
HOMER3-205ENST00000542541 Q9Y3F1 56 aa26.07■■□□□ 1.76
HOMER3-205ENST00000542541 CENPFP49454 3210 aa26.07■■□□□ 1.76
HOMER3-205ENST00000542541 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.06■■□□□ 1.76
HOMER3-205ENST00000542541 MARCKSP29966 332 aaPredicted RBP26.06■■□□□ 1.76
HOMER3-205ENST00000542541 CCND3P30281 292 aaPredicted RBP26.06■■□□□ 1.76
HOMER3-205ENST00000542541 LAMC2Q13753 1193 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 CLEC17AQ6ZS10 378 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 CYFIP1Q7L576 1253 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 LEO1Q8WVC0 666 aaPredicted RBP26.06■■□□□ 1.76
HOMER3-205ENST00000542541 GJA10Q969M2 543 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 SLC9A2Q9UBY0 812 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 KIAA1217Q5T5P2 1943 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 MSCO60682 206 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 KRT76Q01546 638 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 KRI1Q8N9T8 703 aaKnown RBP26.06■■□□□ 1.76
HOMER3-205ENST00000542541 GBP4Q96PP9 640 aa26.06■■□□□ 1.76
HOMER3-205ENST00000542541 SRPRBQ9Y5M8 271 aaKnown RBP26.06■■□□□ 1.76
HOMER3-205ENST00000542541 DUSP11O75319 330 aaKnown RBP26.05■■□□□ 1.76
HOMER3-205ENST00000542541 TECP42680 631 aa26.05■■□□□ 1.76
HOMER3-205ENST00000542541 FXR2P51116 673 aaKnown RBP eCLIP26.05■■□□□ 1.76
HOMER3-205ENST00000542541 PDIA5Q14554 519 aa26.05■■□□□ 1.76
HOMER3-205ENST00000542541 EMID1Q96A84 441 aaPredicted RBP26.05■■□□□ 1.76
HOMER3-205ENST00000542541 GNEQ9Y223 722 aaKnown RBP26.05■■□□□ 1.76
HOMER3-205ENST00000542541 FARP2O94887 1054 aaPredicted RBP26.04■■□□□ 1.76
HOMER3-205ENST00000542541 RARBP10826 455 aa26.04■■□□□ 1.76
HOMER3-205ENST00000542541 ME1P48163 572 aa26.04■■□□□ 1.76
HOMER3-205ENST00000542541 PPP2R5CQ13362 524 aa26.04■■□□□ 1.76
HOMER3-205ENST00000542541 ZNF746Q6NUN9 644 aaPredicted RBP26.04■■□□□ 1.76
HOMER3-205ENST00000542541 AP5M1Q9H0R1 490 aa26.04■■□□□ 1.76
HOMER3-205ENST00000542541 MYH15Q9Y2K3 1946 aa26.04■■□□□ 1.76
HOMER3-205ENST00000542541 VWA3AA6NCI4 1184 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 DDX39AO00148 427 aaKnown RBP26.03■■□□□ 1.76
HOMER3-205ENST00000542541 ARHGAP1Q07960 439 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 TMEM63BQ5T3F8 832 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 COPS5Q92905 334 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 DDX20Q9UHI6 824 aaKnown RBP26.03■■□□□ 1.76
HOMER3-205ENST00000542541 FBXO2Q9UK22 296 aaPredicted RBP26.03■■□□□ 1.76
HOMER3-205ENST00000542541 VAV3Q9UKW4 847 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 NOP56O00567 594 aaKnown RBP26.03■■□□□ 1.76
HOMER3-205ENST00000542541 DYNC1LI2O43237 492 aaPredicted RBP26.03■■□□□ 1.76
HOMER3-205ENST00000542541 SFNP31947 248 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 LONP1P36776 959 aaKnown RBP26.03■■□□□ 1.76
HOMER3-205ENST00000542541 TLK2Q86UE8 772 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 SMAP1Q8IYB5 467 aaPredicted RBP26.03■■□□□ 1.76
HOMER3-205ENST00000542541 OR6J1Q8NGC5 347 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 SPATA33Q96N06 139 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 SPC25Q9HBM1 224 aa26.03■■□□□ 1.76
HOMER3-205ENST00000542541 ADCY6O43306 1168 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 JAK3P52333 1124 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 IL17AQ16552 155 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 BRDTQ58F21 947 aaPredicted RBP26.02■■□□□ 1.76
HOMER3-205ENST00000542541 GJC2Q5T442 439 aaPredicted RBP26.02■■□□□ 1.76
HOMER3-205ENST00000542541 IGSF22Q8N9C0 903 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 RDM1Q8NG50 284 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 ARMC5Q96C12 935 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 AK8Q96MA6 479 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 UNC45AQ9H3U1 944 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 BCAS3Q9H6U6 928 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 GDPD2Q9HCC8 539 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 LRWD1Q9UFC0 647 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 STK24Q9Y6E0 443 aa26.02■■□□□ 1.76
HOMER3-205ENST00000542541 CUTAO60888 179 aa26.01■■□□□ 1.75
HOMER3-205ENST00000542541 ELP1O95163 1332 aa26.01■■□□□ 1.75
HOMER3-205ENST00000542541 SPIRE1Q08AE8 756 aa26.01■■□□□ 1.75
HOMER3-205ENST00000542541 B3GNT9Q6UX72 402 aa26.01■■□□□ 1.75
HOMER3-205ENST00000542541 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.01■■□□□ 1.75
HOMER3-205ENST00000542541 SAMM50Q9Y512 469 aa26.01■■□□□ 1.75
HOMER3-205ENST00000542541 WDR64B1ANS9 1081 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 CHMP2AO43633 222 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 SORBS3O60504 671 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 ACTR2P61160 394 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 SP4Q02446 784 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 MIER3Q7Z3K6 550 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 ZNF579Q8NAF0 562 aaKnown RBP26■■□□□ 1.75
HOMER3-205ENST00000542541 PPTC7Q8NI37 304 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms