RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 NKRFO15226 690 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 SNHG28P0DPA3 235 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PRLRP16471 622 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 TRIM21P19474 475 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 TECP42680 631 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 BTDP43251 543 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ASIC1P78348 528 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ITIH3Q06033 890 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CKAP4Q07065 602 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PDIA5Q14554 519 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 DOK7Q18PE1 504 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CRY2Q49AN0 593 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 TMEM119Q4V9L6 283 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 VWA3BQ502W6 1294 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 USP17L2Q6R6M4 530 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 REXO1Q8N1G1 1221 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 GUF1Q8N442 669 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 FAM71BQ8TC56 605 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 TBCKQ8TEA7 893 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 TATDN2Q93075 761 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CEP95Q96GE4 821 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CALML4Q96GE6 196 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 UCN2Q96RP3 112 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PIGSQ96S52 555 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 NOC4LQ9BVI4 516 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 EDEM3Q9BZQ6 932 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 TSGA10Q9BZW7 698 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CPVLQ9H3G5 476 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ALG2Q9H553 416 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CD209Q9NNX6 404 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 MED4Q9NPJ6 270 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ANKIB1Q9P2G1 1089 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 SAP30BPQ9UHR5 308 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PNMA3Q9UL41 463 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 TFR2Q9UP52 801 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 RTCBQ9Y3I0 505 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 LTBP1Q14766 1721 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 USP17L5A8MUK1 530 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 PDE2AO00408 941 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 ENC1O14682 589 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 PJA2O43164 708 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 N4BP1O75113 896 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 FDX1P10109 184 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 PDHBP11177 359 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 ATP2B4P23634 1241 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 MTIF2P46199 727 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 GYS2P54840 703 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 GPSM2P81274 684 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC63Q05C16 580 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 GABPAQ06546 454 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 PSMD2Q13200 908 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 MAN2A1Q16706 1144 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 ASTE1Q2TB18 679 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 FKBP15Q5T1M5 1219 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 SOGA3Q5TF21 947 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 PPP1R18Q6NYC8 613 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 LRRC55Q6ZSA7 311 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 SV2BQ7L1I2 683 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 KIAA1328Q86T90 577 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 TEX11Q8IYF3 940 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 MMGT1Q8N4V1 131 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 RDH13Q8NBN7 331 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 GOLGA5Q8TBA6 731 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 RUBCNQ92622 972 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 RAD54LQ92698 747 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 ACBD3Q9H3P7 528 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 VPS18Q9P253 973 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 ARHGAP20Q9P2F6 1191 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 LRWD1Q9UFC0 647 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 SEC63Q9UGP8 760 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 DUSP10Q9Y6W6 482 aa5.77□□□□□ -1.49
ATPAF1-212ENST00000542495 EPHB6O15197 1021 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SLC37A4O43826 429 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SRGAP2O75044 1071 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 PRPF6O94906 941 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 IPO7O95373 1038 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 FGFR1OPO95684 399 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SYF2O95926 243 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 ACTN2P35609 894 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 GCGRP47871 477 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 USP46P62068 366 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 CYP27A1Q02318 531 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 GUCA2AQ02747 115 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 KIF5AQ12840 1032 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 SEPT2Q15019 361 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 CALCRLQ16602 461 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 ZSCAN26Q16670 478 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 MAP9Q49MG5 647 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 ZCWPW2Q504Y3 356 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 ASPRV1Q53RT3 343 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 HYIQ5T013 277 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 PPP4R3AQ6IN85 833 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 CCNI2Q6ZMN8 369 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 CCDC84Q86UT8 332 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 CREG2Q8IUH2 290 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 TRIM58Q8NG06 486 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 COG1Q8WTW3 980 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 BAP1Q92560 729 aa5.76□□□□□ -1.49
ATPAF1-212ENST00000542495 LARP4BQ92615 738 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms