RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CAND2O75155 1236 aa17.97■□□□□ 0.47
VPS33A-206ENST00000542310 KCNJ6P48051 423 aa17.97■□□□□ 0.47
VPS33A-206ENST00000542310 GPNMBQ14956 572 aa17.97■□□□□ 0.47
VPS33A-206ENST00000542310 PPP1R18Q6NYC8 613 aa17.97■□□□□ 0.47
VPS33A-206ENST00000542310 DHX32Q7L7V1 743 aaKnown RBP17.97■□□□□ 0.47
VPS33A-206ENST00000542310 SERINC5Q86VE9 423 aa17.97■□□□□ 0.47
VPS33A-206ENST00000542310 HERC6Q8IVU3 1022 aa17.97■□□□□ 0.47
VPS33A-206ENST00000542310 GPR20Q99678 358 aa17.97■□□□□ 0.47
VPS33A-206ENST00000542310 TUT1Q9H6E5 874 aaKnown RBP17.97■□□□□ 0.47
VPS33A-206ENST00000542310 ZNF215Q9UL58 517 aaPredicted RBP17.97■□□□□ 0.47
VPS33A-206ENST00000542310 C17orf102A2RUQ5 167 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 KIF28PB7ZC32 967 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 SORBS3O60504 671 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 NBNO60934 754 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
VPS33A-206ENST00000542310 WDR5P61964 334 aaKnown RBP17.96■□□□□ 0.47
VPS33A-206ENST00000542310 EXOSC10Q01780 885 aaKnown RBP17.96■□□□□ 0.47
VPS33A-206ENST00000542310 TRAF7Q6Q0C0 670 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 CYFIP1Q7L576 1253 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 SKAP1Q86WV1 359 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 CMTR1Q8N1G2 835 aaKnown RBP17.96■□□□□ 0.47
VPS33A-206ENST00000542310 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
VPS33A-206ENST00000542310 USP38Q8NB14 1042 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 ZFP91Q96JP5 570 aaPredicted RBP17.96■□□□□ 0.47
VPS33A-206ENST00000542310 COL25A1Q9BXS0 654 aaPredicted RBP17.96■□□□□ 0.47
VPS33A-206ENST00000542310 EHMT1Q9H9B1 1298 aa17.96■□□□□ 0.47
VPS33A-206ENST00000542310 TRANK1O15050 2925 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 ABHD14A-ACY1A0A1B0GW23 586 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 SPDYE3A6NKU9 549 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 CA3P07451 260 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 SMIM10L2AP0DMW4 78 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 SMIM10L2BP0DMW5 78 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 MYOGP15173 224 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 ADGRE1Q14246 886 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 RAB11FIP4Q86YS3 637 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 WNT8BQ93098 351 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 RTEL1Q9NZ71 1219 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 SIP14410 1827 aa17.95■□□□□ 0.46
VPS33A-206ENST00000542310 ZBTB43O43298 467 aa17.94■□□□□ 0.46
VPS33A-206ENST00000542310 GNAT1P11488 350 aa17.94■□□□□ 0.46
VPS33A-206ENST00000542310 HIC1Q14526 733 aa17.94■□□□□ 0.46
VPS33A-206ENST00000542310 RTN1Q16799 776 aa17.94■□□□□ 0.46
VPS33A-206ENST00000542310 ZNF618Q5T7W0 954 aa17.94■□□□□ 0.46
VPS33A-206ENST00000542310 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
VPS33A-206ENST00000542310 ATP6V0A1Q93050 837 aa17.94■□□□□ 0.46
VPS33A-206ENST00000542310 SPTBN5Q9NRC6 3674 aaKnown RBP17.94■□□□□ 0.46
VPS33A-206ENST00000542310 COL4A6Q14031 1691 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 NID2Q14112 1375 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 MAFGO15525 162 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 KCNA2P16389 499 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 ZNF200P98182 395 aaPredicted RBP17.93■□□□□ 0.46
VPS33A-206ENST00000542310 FUT2Q10981 343 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 UBE2SQ16763 222 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 ADCK5Q3MIX3 580 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 RASEFQ8IZ41 740 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 KCNB2Q92953 911 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 BCAS3Q9H6U6 928 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 UBIAD1Q9Y5Z9 338 aa17.93■□□□□ 0.46
VPS33A-206ENST00000542310 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 LGR5O75473 907 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 ITGB5P18084 799 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 POU3F3P20264 500 aaPredicted RBP17.92■□□□□ 0.46
VPS33A-206ENST00000542310 MTMR1Q13613 665 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 IKBKEQ14164 716 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 MBTPS1Q14703 1052 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 CCDC82Q8N4S0 544 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 SYMPKQ92797 1274 aaKnown RBP17.92■□□□□ 0.46
VPS33A-206ENST00000542310 GLT8D2Q9H1C3 349 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 THEGQ9P2T0 379 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 PCDHA6Q9UN73 950 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 PCDHA8Q9Y5H6 950 aa17.92■□□□□ 0.46
VPS33A-206ENST00000542310 GOLGA8AA7E2F4 631 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 GOLGA8BA8MQT2 603 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 RSPH10B2B2RC85 870 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 TLL1O43897 1013 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 FOSP01100 380 aaPredicted RBP17.91■□□□□ 0.46
VPS33A-206ENST00000542310 RSPH10BP0C881 870 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 IGFBP4P22692 258 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 THPOP40225 353 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 NAPAP54920 295 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 ADAM17P78536 824 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 TAP1Q03518 808 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
VPS33A-206ENST00000542310 TRIM50Q86XT4 487 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 RNPEPQ9H4A4 650 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 RIC8AQ9NPQ8 531 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 JADE2Q9NQC1 790 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 NRCAMQ92823 1304 aa17.91■□□□□ 0.46
VPS33A-206ENST00000542310 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 TREHO43280 583 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 GJB5O95377 273 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 TCF7P36402 384 aaPredicted RBP17.9■□□□□ 0.46
VPS33A-206ENST00000542310 DEFB103AP81534 67 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 AP3B2Q13367 1082 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 PLEKHG4Q58EX7 1191 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 TJAP1Q5JTD0 557 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms