RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 WNK4Q96J92 1243 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 IGFLR1Q9H665 355 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 LAD1O00515 517 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 PTGS1P23219 599 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 LEO1Q8WVC0 666 aaPredicted RBP9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 SEPT1Q8WYJ6 367 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 PCDHB12Q9Y5F1 795 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 RRN3P2A6NIE6 340 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 HUS1O60921 280 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 VWA3BQ502W6 1294 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 SLFN12LQ6IEE8 588 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 PPP1R18Q6NYC8 613 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 C7orf61Q8IZ16 206 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 OR6B3Q8NGW1 331 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 TRMT1Q9NXH9 659 aaKnown RBP9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 MROH2AA6NES4 1674 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 POTEB3A0JP26 581 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 SH2B2O14492 632 aaPredicted RBP9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 STRNO43815 780 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 VIL1P09327 827 aaKnown RBP9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 POTEBQ6S5H4 581 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 HAUS6Q7Z4H7 955 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 STAMQ92783 540 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 FAM149B1Q96BN6 582 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 TXNDC16Q9P2K2 825 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 JAK2O60674 1132 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 TM4SF1P30408 202 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF541Q9H0D2 1346 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 HOXA2O43364 376 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 ADCY5O95622 1261 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 NNMTP40261 264 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF165P49910 485 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 GLYCTKQ8IVS8 523 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 TMEM206Q9H813 350 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 MTMR4Q9NYA4 1195 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 DACT1Q9NYF0 836 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 ROBO1Q9Y6N7 1651 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 SH3BP5O60239 455 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 ERLIN1O75477 346 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 NR3C2P08235 984 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 HSPA4P34932 840 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 RECQLP46063 649 aaPredicted RBP9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 TERF1P54274 439 aa9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 GABPB2Q8TAK5 448 aaPredicted RBP9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 MAGED2Q9UNF1 606 aaPredicted RBP9.48□□□□□ -0.89
FNDC3A-206ENST00000541916 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 GRK4P32298 578 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 PTPN14Q15678 1187 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 MOB2Q70IA6 237 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 BTBD18B2RXH4 712 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 SPOPO43791 374 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 STAM2O75886 525 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 RNASE9P60153 205 aaKnown RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ASIC2Q16515 512 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 GJA10Q969M2 543 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 MTG1Q9BT17 334 aaPredicted RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 TRPC7Q9HCX4 862 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 MOSPD1Q9UJG1 213 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 PRR12Q9ULL5 1215 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 GNA14O95837 355 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ATXN8OSP0DMR3 200 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 OR1G1P47890 313 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 NOP9Q86U38 636 aaKnown RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 AFG1LQ8WV93 481 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 SREK1Q8WXA9 508 aaKnown RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 CCDC42Q96M95 316 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 FARP2O94887 1054 aaPredicted RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 FERP16591 822 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 PEX3P56589 373 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 PAK1Q13153 545 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF449Q6P9G9 518 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 SELENOOQ9BVL4 669 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ERAP1Q9NZ08 941 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ATRNO75882 1429 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 CLDN3O15551 220 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 SEC24BO95487 1268 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ITGA4P13612 1032 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 HOXA10P31260 410 aaPredicted RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 PTGDRQ13258 359 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 KRT81Q14533 505 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 ANO6Q4KMQ2 910 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 KIAA1524Q8TCG1 905 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 PARD3BQ8TEW8 1205 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 NAA15Q9BXJ9 866 aaKnown RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 SUCLA2Q9P2R7 463 aaPredicted RBP9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 PCDHA10Q9Y5I2 948 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 RGS12O14924 1447 aa9.47□□□□□ -0.89
FNDC3A-206ENST00000541916 MAGEB2O15479 319 aa9.46□□□□□ -0.89
FNDC3A-206ENST00000541916 MYL7Q01449 175 aa9.46□□□□□ -0.89
FNDC3A-206ENST00000541916 GRM4Q14833 912 aa9.46□□□□□ -0.89
FNDC3A-206ENST00000541916 SDE2Q6IQ49 451 aa9.46□□□□□ -0.89
FNDC3A-206ENST00000541916 PDZD4Q76G19 769 aaPredicted RBP9.46□□□□□ -0.89
FNDC3A-206ENST00000541916 DDX12PQ92771 950 aa9.46□□□□□ -0.89
FNDC3A-206ENST00000541916 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.89
FNDC3A-206ENST00000541916 PCIF1Q9H4Z3 704 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms