RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 GCNT4Q9P109 453 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 EIF3HO15372 352 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■□□□□ 8.3
SMARCA4-207ENST00000541122 GYG2O15488 501 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 PDE8BO95263 885 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 FGGP02679 453 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 LIG4P49917 911 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 KAZNQ674X7 775 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 PROM2Q8N271 834 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 EEF2KMTQ96G04 330 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 SLITRK6Q9H5Y7 841 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 MAD1L1Q9Y6D9 718 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 JADE1Q6IE81 842 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 CENPUQ71F23 418 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 CHURC1Q8WUH1 139 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 H7C0C1 242 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 KCNQ3O43525 872 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 SRGAP2O75044 1071 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 APOEP02649 317 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 KRT19P08727 400 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 MYCLP12524 364 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 ATP5OP48047 213 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 RWDD2BP57060 319 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 VSNL1P62760 191 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 CXorf38Q8TB03 319 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 NGLY1Q96IV0 654 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
SMARCA4-207ENST00000541122 ELF1P32519 619 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 E4F1Q66K89 784 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 BAG5Q9UL15 447 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 GFPT2O94808 682 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 RCAN1P53805 252 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 NLRX1Q86UT6 975 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 IGSF1Q8N6C5 1336 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 HNRNPCL1O60812 293 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 ACTN1P12814 892 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 CCDC117Q8IWD4 279 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 PPWD1Q96BP3 646 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 TBK1Q9UHD2 729 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 SNX1Q13596 522 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 FAM102BQ5T8I3 360 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 TRIML2Q8N7C3 387 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 GFM2Q969S9 779 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 STAMBPL1Q96FJ0 436 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 TRAIPQ9BWF2 469 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 SUFUQ9UMX1 484 aa16.16■□□□□ 0.18
SMARCA4-207ENST00000541122 TNNC2P02585 160 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 KPNA2P52292 529 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ODR4Q5SWX8 454 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 TTC25Q96NG3 672 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 SH3GLB2Q9NR46 395 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ATP10AO60312 1499 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 CPP00450 1065 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 PLCG1P19174 1290 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 PMS2P54278 862 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ADCY1Q08828 1119 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 LRIG3Q6UXM1 1119 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ZFP69BQ9UJL9 534 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ZBED4O75132 1171 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 TRPA1O75762 1119 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 IQCB1Q15051 598 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 MXD3Q9BW11 206 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 AZI2Q9H6S1 392 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 MCF2LO15068 1137 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 HNRNPLLQ8WVV9 542 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 WDR24Q96S15 920 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ECT2Q9H8V3 914 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 MRPL11Q9Y3B7 192 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-207ENST00000541122 ARHGAP10A1A4S6 786 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 DMP1Q13316 513 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 GRAMD1BQ3KR37 738 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 RFX6Q8HWS3 928 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 MTA3Q9BTC8 594 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 ST7Q9NRC1 585 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 PLS3P13797 630 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 ABCD1P33897 745 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 MDH1P40925 334 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 CORO7P57737 925 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 MDM2Q00987 491 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 PLCB4Q15147 1175 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 LRRC37BQ96QE4 947 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 EDEM3Q9BZQ6 932 aa16.14■□□□□ 0.17
SMARCA4-207ENST00000541122 GSTA1P08263 222 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms