RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TPM4P67936 248 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 PPATQ06203 517 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 EHHADHQ08426 723 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 PAK1Q13153 545 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 PLS1Q14651 629 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 TKFCQ3LXA3 575 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 UNC13DQ70J99 1090 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 ANKRD13AQ8IZ07 590 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 DYDC2Q96IM9 177 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 PDCD2LQ9BRP1 358 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 ZNF577Q9BSK1 485 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 SLC39A2Q9NP94 309 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 EXOC1Q9NV70 894 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 RWDD2AQ9UIY3 292 aa13.72□□□□□ -0.21
AP003559.1-201ENST00000540906 ASTN1O14525 1302 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 DHX15O43143 795 aaKnown RBP13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 CNMDO75829 334 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 SERPINC1P01008 464 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 MYCLP12524 364 aaPredicted RBP13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 CYP11B2P19099 503 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 RPA1P27694 616 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 SLC12A3P55017 1021 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 UBASH3AP57075 661 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 RAD51AP2Q09MP3 1159 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 PPP2R5CQ13362 524 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 CT47A1Q5JQC4 288 aaPredicted RBP13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 TMC6Q7Z403 805 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 FILIP1Q7Z7B0 1213 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 ERO1BQ86YB8 467 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 OPTNQ96CV9 577 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 RMDN3Q96TC7 470 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 HSD17B14Q9BPX1 270 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 POLD4Q9HCU8 107 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 A1CFQ9NQ94 594 aaKnown RBP13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 KCNH7Q9NS40 1196 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 KCNH4Q9UQ05 1017 aa13.71□□□□□ -0.21
AP003559.1-201ENST00000540906 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 GAS7O60861 476 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 ATP9AO75110 1047 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 SLITRK3O94933 977 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 IDEP14735 1019 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 YY1P25490 414 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 NF2P35240 595 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 AMPD3Q01432 767 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 FSTL1Q12841 308 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 SEMA3FQ13275 785 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 LRRC41Q15345 812 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 TTI2Q6NXR4 508 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 LBX2Q6XYB7 198 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 GPBP1Q86WP2 473 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 DUSP9Q99956 384 aaKnown RBP13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 AGO4Q9HCK5 861 aaKnown RBP13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 CYP39A1Q9NYL5 469 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 TELO2Q9Y4R8 837 aa13.71□□□□□ -0.22
AP003559.1-201ENST00000540906 MYPNQ86TC9 1320 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 IPO5O00410 1097 aaKnown RBP13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 TEX33O43247 280 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 GOLGA8FQ08AF8 430 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 GOLGA8DPQ0D2H9 430 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 COASYQ13057 564 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 PPIL2Q13356 520 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 LDLRAD1Q5T700 205 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 HAUS3Q68CZ6 603 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 ERMNQ8TAM6 284 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 POLR3CQ9BUI4 534 aaPredicted RBP13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 SEMA6BQ9H3T3 888 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 JADE2Q9NQC1 790 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
AP003559.1-201ENST00000540906 RGS20O76081 388 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 HOXA7P31268 230 aaPredicted RBP13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 ARHGEF16Q5VV41 709 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 ANKRD40Q6AI12 368 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 GPAT2Q6NUI2 795 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 ARMCX5Q6P1M9 558 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 PIGOQ8TEQ8 1089 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 RUSC1Q9BVN2 902 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 ASCC2Q9H1I8 757 aaPredicted RBP13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 TBC1D7Q9P0N9 293 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 PCDHA2Q9Y5H9 948 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 KIAA1217Q5T5P2 1943 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 PVALEFA0A1B0GWK0 134 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 CXCL11O14625 94 aa13.69□□□□□ -0.22
AP003559.1-201ENST00000540906 SLC26A4O43511 780 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms