RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 USP46P62068 366 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 TFCP2Q12800 502 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 HLTFQ14527 1009 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 TRADDQ15628 312 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 CACNA2D4Q7Z3S7 1137 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 C1orf131Q8NDD1 294 aaKnown RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 MAGOHBQ96A72 148 aaKnown RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 UNC45AQ9H3U1 944 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 SNRKQ9NRH2 765 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 SAMD15Q9P1V8 674 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 ITIH6Q6UXX5 1313 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 DCDC2CA8MYV0 355 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 TNFRSF8P28908 595 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 CYP27A1Q02318 531 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 APBB1IPQ7Z5R6 666 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 NLRP10Q86W26 655 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 SMYD4Q8IYR2 804 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 ANKRD27Q96NW4 1050 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 NKX1-2Q9UD57 310 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-202ENST00000540876 LRRC42Q9Y546 428 aa10.64□□□□□ -0.71
CLDN2-202ENST00000540876 GBP1P32455 592 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
CLDN2-202ENST00000540876 SERPINB4P48594 390 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 CBX3Q13185 183 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 SLC15A2Q16348 729 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 KBTBD12Q3ZCT8 623 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 TMEM110Q86TL2 294 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
CLDN2-202ENST00000540876 TRAPPC9Q96Q05 1148 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 XPO6Q96QU8 1125 aaKnown RBP10.63□□□□□ -0.71
CLDN2-202ENST00000540876 SEC31BQ9NQW1 1179 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 NARFQ9UHQ1 456 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 TRMT112Q9UI30 125 aaKnown RBP10.63□□□□□ -0.71
CLDN2-202ENST00000540876 SCOCQ9UIL1 159 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 TMCO1Q9UM00 188 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 USH1CQ9Y6N9 552 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 PNPLA7Q6ZV29 1317 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 CPLX1O14810 134 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 PPP6R2O75170 966 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 E2F6O75461 281 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 VIL1P09327 827 aaKnown RBP10.63□□□□□ -0.71
CLDN2-202ENST00000540876 RARAP10276 462 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 NAT1P18440 290 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 DNA2P51530 1060 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 KIF5AQ12840 1032 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 KRT31Q15323 416 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 TCERG1LQ5VWI1 586 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 OR52E8Q6IFG1 317 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 RUFY4Q6ZNE9 571 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 HOOK3Q86VS8 718 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 MREGQ8N565 214 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 UCMAQ8WVF2 138 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 CASKIN2Q8WXE0 1202 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 GBP5Q96PP8 586 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 VCX3BQ9H321 246 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 VCX3AQ9NNX9 186 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 GPHNQ9NQX3 736 aaPredicted RBP10.63□□□□□ -0.71
CLDN2-202ENST00000540876 CWC25Q9NXE8 425 aaPredicted RBP10.63□□□□□ -0.71
CLDN2-202ENST00000540876 TMOD4Q9NZQ9 345 aa10.63□□□□□ -0.71
CLDN2-202ENST00000540876 TTC26A0AVF1 554 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 HGSO14964 777 aaPredicted RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 CETN3O15182 167 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 HNRNPRO43390 633 aaKnown RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 NCK2O43639 380 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 USO1O60763 962 aaKnown RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 SUPT3HO75486 399 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 GFPT2O94808 682 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 GYS1P13807 737 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 ITIH3Q06033 890 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 ITIH4Q14624 930 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 TSNAXIP1Q2TAA8 658 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 MS4A14Q96JA4 679 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 ISCA1Q9BUE6 129 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 GDF3Q9NR23 364 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 TRIM33Q9UPN9 1127 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 LUC7L2Q9Y383 392 aaKnown RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 TACC1O75410 805 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 PENKP01210 267 aaPredicted RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 PAEPP09466 180 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 HSD17B3P37058 310 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 UBXN1Q04323 297 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 ZNF844Q08AG5 666 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 BIRC3Q13489 604 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 PRPF4BQ13523 1007 aaKnown RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 TRIM14Q14142 442 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 R3HDM1Q15032 1099 aaKnown RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 CDKAL1Q5VV42 579 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 LMBR1LQ6UX01 489 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 ZNF365Q70YC5 407 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 WHAMMQ8TF30 809 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 IWS1Q96ST2 819 aa10.62□□□□□ -0.71
CLDN2-202ENST00000540876 DBNLQ9UJU6 430 aaKnown RBP10.62□□□□□ -0.71
CLDN2-202ENST00000540876 CD2APQ9Y5K6 639 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms