RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 BRMS1Q9HCU9 246 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 ZHX1Q9UKY1 873 aaPredicted RBP19.01■□□□□ 0.63
UBC-208ENST00000540700 UBIAD1Q9Y5Z9 338 aa19.01■□□□□ 0.63
UBC-208ENST00000540700 MYH7BA7E2Y1 1941 aa19■□□□□ 0.63
UBC-208ENST00000540700 NCOR1O75376 2440 aa19■□□□□ 0.63
UBC-208ENST00000540700 CCDC194A0A1B0GVG4 234 aa19■□□□□ 0.63
UBC-208ENST00000540700 STX6O43752 255 aa19■□□□□ 0.63
UBC-208ENST00000540700 EIF3JO75822 258 aaKnown RBP19■□□□□ 0.63
UBC-208ENST00000540700 TDP2O95551 362 aa19■□□□□ 0.63
UBC-208ENST00000540700 RESTQ13127 1097 aa19■□□□□ 0.63
UBC-208ENST00000540700 SAFBQ15424 915 aaKnown RBP eCLIP19■□□□□ 0.63
UBC-208ENST00000540700 STXBP2Q15833 593 aa19■□□□□ 0.63
UBC-208ENST00000540700 FERMT3Q86UX7 667 aa19■□□□□ 0.63
UBC-208ENST00000540700 LENG9Q96B70 501 aa19■□□□□ 0.63
UBC-208ENST00000540700 INPP4AQ96PE3 977 aaPredicted RBP19■□□□□ 0.63
UBC-208ENST00000540700 WDR11Q9BZH6 1224 aa19■□□□□ 0.63
UBC-208ENST00000540700 ABHD16BQ9H3Z7 469 aa19■□□□□ 0.63
UBC-208ENST00000540700 VTA1Q9NP79 307 aa19■□□□□ 0.63
UBC-208ENST00000540700 IGLV3-22A0A075B6J6 115 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 RBM47A0AV96 593 aaKnown RBP18.99■□□□□ 0.63
UBC-208ENST00000540700 PDCP20941 246 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 CIITAP33076 1130 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 TOB1P50616 345 aaPredicted RBP18.99■□□□□ 0.63
UBC-208ENST00000540700 SP2Q02086 613 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 FAAP100Q0VG06 881 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 NBR1Q14596 966 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 MCTP2Q6DN12 878 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 MCTP1Q6DN14 999 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 SEPT14Q6ZU15 432 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 GAS2L1Q99501 681 aaPredicted RBP18.99■□□□□ 0.63
UBC-208ENST00000540700 BCAS3Q9H6U6 928 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 NRBP1Q9UHY1 535 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 ZDHHC9Q9Y397 364 aa18.99■□□□□ 0.63
UBC-208ENST00000540700 GRXCR1A8MXD5 290 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 DCDC2CA8MYV0 355 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 ARP10275 920 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 SMPD1P17405 629 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 PBX2P40425 430 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 CCDC144BQ3MJ40 725 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 XRRA1Q6P2D8 792 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 CCDC62Q6P9F0 684 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 COPS5Q92905 334 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 MBOAT7Q96N66 472 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 UIMC1Q96RL1 719 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.63
UBC-208ENST00000540700 MXRA8Q9BRK3 442 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 PRDM12Q9H4Q4 367 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 EHMT1Q9H9B1 1298 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 JADE2Q9NQC1 790 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 STARD7Q9NQZ5 370 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 CNPY2Q9Y2B0 182 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 CHD9Q3L8U1 2897 aa18.98■□□□□ 0.63
UBC-208ENST00000540700 MEIS1O00470 390 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 SLC37A4O43826 429 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 ATP9AO75110 1047 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 AKR1A1P14550 325 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 ACLYP53396 1101 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 IRX5P78411 483 aaPredicted RBP18.97■□□□□ 0.63
UBC-208ENST00000540700 CCDC85BQ15834 202 aaPredicted RBP18.97■□□□□ 0.63
UBC-208ENST00000540700 LETM2Q2VYF4 491 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 CEP55Q53EZ4 464 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 FOXD4L5Q5VV16 416 aaPredicted RBP18.97■□□□□ 0.63
UBC-208ENST00000540700 FAM173BQ6P4H8 233 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 NEK8Q86SG6 692 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 FOXD4L4Q8WXT5 416 aaPredicted RBP18.97■□□□□ 0.63
UBC-208ENST00000540700 TELO2Q9Y4R8 837 aa18.97■□□□□ 0.63
UBC-208ENST00000540700 CYP3A7-CYP3A51PA0A087WV96 503 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 SPATA31C2B4DYI2 1134 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 TIMP1P01033 207 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 CYP3A7P24462 503 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 ICAM3P32942 547 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 USP11P51784 963 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 LY6KQ17RY6 165 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 ANKRD33Q7Z3H0 272 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 GJA10Q969M2 543 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 MPHOSPH6Q99547 160 aaKnown RBP18.96■□□□□ 0.63
UBC-208ENST00000540700 PBX4Q9BYU1 374 aa18.96■□□□□ 0.63
UBC-208ENST00000540700 DDX41Q9UJV9 622 aaKnown RBP18.96■□□□□ 0.63
UBC-208ENST00000540700 GNEQ9Y223 722 aaKnown RBP18.96■□□□□ 0.63
UBC-208ENST00000540700 MYO9BQ13459 2157 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 B4DLN1 442 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 SORBS3O60504 671 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 ADAMTS4O75173 837 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 STAM2O75886 525 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 ADAMTS19Q8TE59 1207 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 ATXN2LQ8WWM7 1075 aaKnown RBP18.95■□□□□ 0.62
UBC-208ENST00000540700 TOX2Q96NM4 488 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 ASB2Q96Q27 587 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 THEGQ9P2T0 379 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 KIAA1217Q5T5P2 1943 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 SYNRGQ9UMZ2 1314 aa18.95■□□□□ 0.62
UBC-208ENST00000540700 BRD1O95696 1058 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 KCNA2P16389 499 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 ATP2B1P20020 1258 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
UBC-208ENST00000540700 IGFBP4P22692 258 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 ZNF76P36508 570 aa18.94■□□□□ 0.62
UBC-208ENST00000540700 ITGB3BPQ13352 177 aaPredicted RBP18.94■□□□□ 0.62
UBC-208ENST00000540700 GNL2Q13823 731 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms