RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 GUCY2FP51841 1108 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 MTTPP55157 894 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 PPARAQ07869 468 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 ITIH4Q14624 930 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 RASIP1Q5U651 963 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 HAUS3Q68CZ6 603 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 KLHL10Q6JEL2 608 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 SLC2A7Q6PXP3 512 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 MREGQ8N565 214 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 ANKK1Q8NFD2 765 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 DNAJC9Q8WXX5 260 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 LENG1Q96BZ8 264 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-214ENST00000540539 KLHL29Q96CT2 875 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 CHMP6Q96FZ7 201 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 DCAF5Q96JK2 942 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 TCHPQ9BT92 498 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 SPATA16Q9BXB7 569 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 PHAXQ9H814 394 aaKnown RBP10.34□□□□□ -0.75
CLIP1-214ENST00000540539 PFDN4Q9NQP4 134 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 HESX1Q9UBX0 185 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 INTUQ9ULD6 942 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 WWC3Q9ULE0 1092 aa10.34□□□□□ -0.75
CLIP1-214ENST00000540539 ADAMTS7Q9UKP4 1686 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 THSD7AQ9UPZ6 1657 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 GYPCP04921 128 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 PYGMP11217 842 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 USP11P51784 963 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 NEK2P51955 445 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 VAV2P52735 878 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 PSMC1P62191 440 aaKnown RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 HPCAP84074 193 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 STK38Q15208 465 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 OLFML2BQ68BL8 750 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 CACNA2D4Q7Z3S7 1137 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 SCUBE1Q8IWY4 988 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 TRMT44Q8IYL2 757 aaKnown RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 BHMTQ93088 406 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 DHTKD1Q96HY7 919 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 ALDH8A1Q9H2A2 487 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 RNPEPL1Q9HAU8 725 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 TFR2Q9UP52 801 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 HEY1Q9Y5J3 304 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 CLIC4Q9Y696 253 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 BCL9O00512 1426 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 E7ENQ6 273 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 ETS2P15036 469 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 KCNA3P22001 575 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 CALB2P22676 271 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 PDE6CP51160 858 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 PPP2R2AP63151 447 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 PLS1Q14651 629 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 IMMTQ16891 758 aaKnown RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 CNGA4Q8IV77 575 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 PEX5LQ8IYB4 626 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 SLC17A8Q8NDX2 589 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 XPO6Q96QU8 1125 aaKnown RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 SIKE1Q9BRV8 207 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 ARHGEF3Q9NR81 526 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 SAMSN1Q9NSI8 373 aaKnown RBP10.33□□□□□ -0.76
CLIP1-214ENST00000540539 PLAAQ9Y263 795 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 COMMD3-BMI1R4GMX3 469 aa10.33□□□□□ -0.76
CLIP1-214ENST00000540539 GOLGA8AA7E2F4 631 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 ONECUT3O60422 494 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 TPPPO94811 219 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 GBP1P32455 592 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 PBX1P40424 430 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CARSP49589 748 aaKnown RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 GEMIN4P57678 1058 aaKnown RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 TEFQ10587 303 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CFAP157Q5JU67 520 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 APTXQ7Z2E3 356 aaKnown RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 DAAM2Q86T65 1068 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CREG2Q8IUH2 290 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 KCNG4Q8TDN1 519 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 RUFY2Q8WXA3 655 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CCDC51Q96ER9 411 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CTNNAL1Q9UBT7 734 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 RGS17Q9UGC6 210 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 NFU1Q9UMS0 254 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 TACC1O75410 805 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 ALDH2P05091 517 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 TPBGLP0DKB5 382 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 MATR3P43243 847 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 ARPC4P59998 168 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CYP4A11Q02928 519 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 DMPKQ09013 629 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CAMK2BQ13554 666 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 KRT72Q14CN4 511 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 ZC2HC1CQ53FD0 456 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 CHADLQ6NUI6 762 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 SPATA4Q8NEY3 305 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 HAUS4Q9H6D7 363 aa10.32□□□□□ -0.76
CLIP1-214ENST00000540539 KIAA1522Q9P206 1035 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-214ENST00000540539 GCOM1H8Y6P7 765 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms