RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 KCNJ14Q9UNX9 436 aa20.89■□□□□ 0.93
SNRPA1-203ENST00000540017 MEIS1O00470 390 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 TLR3O15455 904 aaKnown RBP20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 F2P00734 622 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 CYP3A4P08684 503 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 SP4Q02446 784 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 CEP55Q53EZ4 464 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 FAM47CQ5HY64 1035 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 NFRKBQ6P4R8 1299 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 NSUN7Q8NE18 718 aaKnown RBP20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 BICD2Q8TD16 824 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 CDHR1Q96JP9 859 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 LBHD1Q9BQE6 289 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 C16orf70Q9BSU1 422 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 SEZ6LQ9BYH1 1024 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 ORC3Q9UBD5 711 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 PCDHA4Q9UN74 947 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 LIMCH1Q9UPQ0 1083 aa20.88■□□□□ 0.93
SNRPA1-203ENST00000540017 FAM86B1E9PN63 330 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 M0R2N6 131 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 HAS3O00219 553 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 MAFGO15525 162 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 JAK2O60674 1132 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 FAM86B2P0C5J1 330 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 RAG1P15918 1043 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 PSEN2P49810 448 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 MCTP2Q6DN12 878 aa20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 UBE2OQ9C0C9 1292 aaKnown RBP20.87■□□□□ 0.93
SNRPA1-203ENST00000540017 UMODL1Q5DID0 1318 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 IGLV3-22A0A075B6J6 115 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 NOP56O00567 594 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 TIMP1P01033 207 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 MFSD10Q14728 455 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 BLIDQ8IZY5 108 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 DAGLBQ8NCG7 672 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 ALG1Q9BT22 464 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 PHF20Q9BVI0 1012 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 PPP1R12CQ9BZL4 782 aa20.86■□□□□ 0.93
SNRPA1-203ENST00000540017 LGALS2P05162 132 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 CYP2C9P11712 490 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 ZNF76P36508 570 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 EPHB4P54760 987 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 ITGB3BPQ13352 177 aaPredicted RBP20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 KIAA0753Q2KHM9 967 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 GDF6Q6KF10 455 aaPredicted RBP20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 NIPA1Q7RTP0 329 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 GIMAP8Q8ND71 665 aaPredicted RBP20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 TBC1D32Q96NH3 1257 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 UIMC1Q96RL1 719 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 CTAGE1Q96RT6 745 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 AGO4Q9HCK5 861 aaKnown RBP20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 HDAC6Q9UBN7 1215 aa20.85■□□□□ 0.93
SNRPA1-203ENST00000540017 TRIOBPQ9H2D6 2365 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 GSTTP1A0A1W2PQM5 241 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 CYP2C18P33260 490 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 PTPN11Q06124 597 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 HIC1Q14526 733 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 RABEP1Q15276 862 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 SESTD1Q86VW0 696 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 PLA2G4DQ86XP0 818 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 TRIM50Q86XT4 487 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 CCDC83Q8IWF9 413 aa20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 FAM177A1Q8N128 213 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 NOC4LQ9BVI4 516 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 UPF2Q9HAU5 1272 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-203ENST00000540017 CIITAP33076 1130 aa20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 UTP14CQ5TAP6 766 aaKnown RBP20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 GALNT17Q6IS24 598 aa20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 OXER1Q8TDS5 423 aa20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 TBCKQ8TEA7 893 aa20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 KATNAL1Q9BW62 490 aa20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 BACH2Q9BYV9 841 aa20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 HIPK3Q9H422 1215 aa20.83■□□□□ 0.93
SNRPA1-203ENST00000540017 NFASCO94856 1347 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 LAMA3Q16787 3333 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 H3BRB1 525 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 CD2BP2O95400 341 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 TCF7P36402 384 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 ZNF200P98182 395 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 MFSD5Q6N075 450 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 TDHQ8IZJ6 230 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 C7orf31Q8N865 590 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 SEPT1Q8WYJ6 367 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 LENG9Q96B70 501 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 WNT8AQ9H1J5 351 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 TUT1Q9H6E5 874 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 SLC9A2Q9UBY0 812 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 GTF2IRD1Q9UHL9 959 aa20.82■□□□□ 0.92
SNRPA1-203ENST00000540017 A0A1W2PPC1 479 aa20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 DHX15O43143 795 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 SUPT20HL2P0C7V6 817 aa20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 PTGISQ16647 500 aa20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 PRR16Q569H4 304 aa20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 C9orf50Q5SZB4 431 aa20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 WASF1Q92558 559 aa20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 PCYT2Q99447 389 aa20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 JPH1Q9HDC5 661 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-203ENST00000540017 CCNE2O96020 404 aa20.8■□□□□ 0.92
SNRPA1-203ENST00000540017 CSF2RAP15509 400 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms