RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 A0A1W2PP64 1363 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 PCP11498 1178 aaKnown RBP13.83□□□□□ -0.2
CACNB4-210ENST00000539935 COPB1P53618 953 aaKnown RBP13.83□□□□□ -0.2
CACNB4-210ENST00000539935 PLA2G4DQ86XP0 818 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 SUCLG2Q96I99 432 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 SLC52A2Q9HAB3 445 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 WARS2Q9UGM6 360 aaKnown RBP13.83□□□□□ -0.2
CACNB4-210ENST00000539935 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 ZNF500O60304 480 aaPredicted RBP13.83□□□□□ -0.2
CACNB4-210ENST00000539935 BRD1O95696 1058 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 TMED2Q15363 201 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 TCP11X2Q5H9J9 407 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 C10orf76Q5T2E6 689 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 RETREG2Q8NC44 543 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 SYMPKQ92797 1274 aaKnown RBP13.83□□□□□ -0.2
CACNB4-210ENST00000539935 KDM1AO60341 852 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 ATP7AQ04656 1500 aa13.83□□□□□ -0.2
CACNB4-210ENST00000539935 PNMA6EA0A0J9YXQ4 647 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 PGRMC1O00264 195 aaKnown RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 DDAH1O94760 285 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 CMTR1Q8N1G2 835 aaKnown RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 PHF21AQ96BD5 680 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 EPB41L5Q9HCM4 733 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 TRAPPC8Q9Y2L5 1435 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 MRPL47Q9HD33 250 aaKnown RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 ECEL1O95672 775 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 CACTINQ8WUQ7 758 aaKnown RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 ATP8B1O43520 1251 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 CHEK2O96017 543 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 PMLP29590 882 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 NDUFA8P51970 172 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 CTSWP56202 376 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 CYP4F22Q6NT55 531 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 TAGAPQ8N103 731 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 KCTD6Q8NC69 237 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 KIAA1024Q9UPX6 916 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 MED7O43513 233 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 SNX25Q9H3E2 840 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 CCDC87Q9NVE4 849 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 THRAP3Q9Y2W1 955 aaKnown RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 NR2F2P24468 414 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 PSMC2P35998 433 aaKnown RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 GIPC2Q8TF65 315 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 TOM1L1O75674 476 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 ARL4AP40617 200 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 JPH2Q9BR39 696 aaPredicted RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 FGFR1OP2Q9NVK5 253 aa13.82□□□□□ -0.2
CACNB4-210ENST00000539935 SEPT9Q9UHD8 586 aaPredicted RBP13.82□□□□□ -0.2
CACNB4-210ENST00000539935 MAP3K19Q56UN5 1328 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PPP1R13BQ96KQ4 1090 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 USP28Q96RU2 1077 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 MID2Q9UJV3 735 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 MT-ND3P03897 115 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 KRT7P08729 469 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 CDC25BP30305 580 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 FSCBQ5H9T9 825 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PATL1Q86TB9 770 aaKnown RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 ST13P4Q8IZP2 240 aaPredicted RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 NAF1Q96HR8 494 aaKnown RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 ING2Q9H160 280 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 TCF3P15923 654 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 KIF17Q9P2E2 1029 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 GTF2IP78347 998 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 POLA2Q14181 598 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 GADL1Q6ZQY3 521 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 STRIP2Q9ULQ0 834 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 NCF2P19878 526 aaPredicted RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PPARGP37231 505 aaPredicted RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 OCRLQ01968 901 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PPP6R3Q5H9R7 873 aaPredicted RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 SORBS3O60504 671 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PFKFB2O60825 505 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 FOSP01100 380 aaPredicted RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 HSPA6P17066 643 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PLTPP55058 493 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 EAPPQ56P03 285 aaPredicted RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PBKQ96KB5 322 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 AK8Q96MA6 479 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 RNF14Q9UBS8 474 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 RRP15Q9Y3B9 282 aaKnown RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 GAP43P17677 238 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 PTK2BQ14289 1009 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 CAPRIN1Q14444 709 aaKnown RBP13.81□□□□□ -0.2
CACNB4-210ENST00000539935 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 FAM149B1Q96BN6 582 aa13.81□□□□□ -0.2
CACNB4-210ENST00000539935 UBE3AQ05086 875 aa13.8□□□□□ -0.2
CACNB4-210ENST00000539935 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
CACNB4-210ENST00000539935 RAPGEF5Q92565 580 aa13.8□□□□□ -0.2
CACNB4-210ENST00000539935 DHTKD1Q96HY7 919 aaPredicted RBP13.8□□□□□ -0.2
CACNB4-210ENST00000539935 INTUQ9ULD6 942 aa13.8□□□□□ -0.2
CACNB4-210ENST00000539935 EXOC1LA0A1B0GW35 172 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms