RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 CD209Q9NNX6 404 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 PIM2Q9P1W9 311 aa13.12□□□□□ -0.31
NEK6-212ENST00000539416 STK36Q9NRP7 1315 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 SMNDC1O75940 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
NEK6-212ENST00000539416 ADD2P35612 726 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 CTDSPL2Q05D32 466 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 UBE3CQ15386 1083 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
NEK6-212ENST00000539416 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 APPBP2Q92624 585 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 SHISA4Q96DD7 197 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 GPR101Q96P66 508 aaPredicted RBP13.11□□□□□ -0.31
NEK6-212ENST00000539416 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
NEK6-212ENST00000539416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.319e-7■■■■□ 24.3
NEK6-212ENST00000539416 CLTAP09496 248 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 IFNAR1P17181 557 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 TRIM21P19474 475 aaKnown RBP13.11□□□□□ -0.31
NEK6-212ENST00000539416 RWDD2BP57060 319 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 MAP3K12Q12852 859 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
NEK6-212ENST00000539416 TLR10Q9BXR5 811 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 YIPF3Q9GZM5 350 aa13.11□□□□□ -0.31
NEK6-212ENST00000539416 IQSEC3Q9UPP2 1182 aaPredicted RBP13.11□□□□□ -0.31
NEK6-212ENST00000539416 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
NEK6-212ENST00000539416 TRIM75PA6NK02 468 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 F8W031 263 aaPredicted RBP13.1□□□□□ -0.31
NEK6-212ENST00000539416 DNA2P51530 1060 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
NEK6-212ENST00000539416 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 ARFGAP2Q8N6H7 521 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 C3orf20Q8ND61 904 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
NEK6-212ENST00000539416 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 DCDC2CA8MYV0 355 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 H7C1D1 291 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 UPP2O95045 317 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 SPA17Q15506 151 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 ZNF658Q5TYW1 1059 aaPredicted RBP13.1□□□□□ -0.31
NEK6-212ENST00000539416 WDR66Q8TBY9 1149 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 AGAP11Q8TF27 550 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 CCDC42Q96M95 316 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
NEK6-212ENST00000539416 TSGA10Q9BZW7 698 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 KDM4CQ9H3R0 1056 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 PANK4Q9NVE7 773 aa13.1□□□□□ -0.31
NEK6-212ENST00000539416 CPSF2Q9P2I0 782 aaKnown RBP13.1□□□□□ -0.31
NEK6-212ENST00000539416 H0YGN5 161 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 GHRP10912 638 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 PDE6AP16499 860 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 DRD4P21917 467 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 ZBED6P86452 979 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 UAP1Q16222 522 aaPredicted RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 WASF1Q92558 559 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 KRT12Q99456 494 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 NFS1Q9Y697 457 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 GCOM1H8Y6P7 765 aaPredicted RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 MPHOSPH10O00566 681 aaKnown RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 NKRFO15226 690 aaKnown RBP eCLIP13.09□□□□□ -0.31
NEK6-212ENST00000539416 USO1O60763 962 aaKnown RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 DIAPH2O60879 1101 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 MYZAPP0CAP1 466 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 PECAM1P16284 738 aaPredicted RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 HSD17B3P37058 310 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 HSPA9P38646 679 aaKnown RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 RAB27AP51159 221 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 RNASE9P60153 205 aaKnown RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 ZNF174Q15697 407 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 GKAP1Q5VSY0 366 aaPredicted RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 PDXDC2PQ6P474 469 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 CPLX4Q7Z7G2 160 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 TBC1D1Q86TI0 1168 aaPredicted RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 CCDC63Q8NA47 563 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 TMEM87BQ96K49 555 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 PSMD1Q99460 953 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 VPS33BQ9H267 617 aa13.09□□□□□ -0.31
NEK6-212ENST00000539416 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
NEK6-212ENST00000539416 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 IFIT3O14879 490 aaKnown RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 RBBP5Q15291 538 aaKnown RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 KLHDC7AQ5VTJ3 777 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 SPTY2D1Q68D10 685 aaPredicted RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 PCMTD1Q96MG8 357 aaPredicted RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 NDST4Q9H3R1 872 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 PLCB1Q9NQ66 1216 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms