RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 LARP4BQ92615 738 aaKnown RBP16.15■□□□□ 0.18
CDCA3-207ENST00000538862 PCMTD1Q96MG8 357 aaPredicted RBP16.15■□□□□ 0.18
CDCA3-207ENST00000538862 ATP1A1P05023 1023 aaKnown RBP16.14■□□□□ 0.17
CDCA3-207ENST00000538862 SNHG28P0DPA3 235 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 MMP14P50281 582 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 ADCY7P51828 1080 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 USP14P54578 494 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 PSMD2Q13200 908 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 PPP1R18Q6NYC8 613 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 GUF1Q8N442 669 aaKnown RBP16.14■□□□□ 0.17
CDCA3-207ENST00000538862 MTMR14Q8NCE2 650 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 UBA5Q9GZZ9 404 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 VEZTQ9HBM0 779 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 MTMR4Q9NYA4 1195 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 PLAGL2Q9UPG8 496 aa16.14■□□□□ 0.17
CDCA3-207ENST00000538862 TARSL2A2RTX5 802 aaKnown RBP16.13■□□□□ 0.17
CDCA3-207ENST00000538862 H3BQF6 201 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 CRKP46108 304 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 KLK7P49862 253 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 VAV2P52735 878 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 LRRC63Q05C16 580 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 MCM6Q14566 821 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 VWA3BQ502W6 1294 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 CDK5RAP3Q96JB5 506 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 GBA2Q9HCG7 927 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-207ENST00000538862 PDE11AQ9HCR9 933 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 SLC39A2Q9NP94 309 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 MYMKA6NI61 221 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 ENC1O14682 589 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 HUNKP57058 714 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 GABPAQ06546 454 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 KIF5AQ12840 1032 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 CASP8Q14790 479 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 MAN2A1Q16706 1144 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 MOB2Q70IA6 237 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 CCDC84Q86UT8 332 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-207ENST00000538862 RAD54LQ92698 747 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 LACRTQ9GZZ8 138 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 ACBD3Q9H3P7 528 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 TDRD3Q9H7E2 651 aaKnown RBP16.13■□□□□ 0.17
CDCA3-207ENST00000538862 SERPINA10Q9UK55 444 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 ADAM21Q9UKJ8 722 aa16.13■□□□□ 0.17
CDCA3-207ENST00000538862 IGKV6D-41A0A0C4DH26 115 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 SPA17Q15506 151 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 PPP4R3AQ6IN85 833 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 EEF2KMTQ96G04 330 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 CCDC42Q96M95 316 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 NDST4Q9H3R1 872 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 VIPAS39Q9H9C1 493 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 HDAC6Q9UBN7 1215 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 SIK3Q9Y2K2 1263 aa16.12■□□□□ 0.17
CDCA3-207ENST00000538862 RCCD1A6NED2 376 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 EDIL3O43854 480 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 USO1O60763 962 aaKnown RBP16.11■□□□□ 0.17
CDCA3-207ENST00000538862 LCA5LO95447 670 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 KRT79Q5XKE5 535 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 APOBEC3FQ8IUX4 373 aaKnown RBP16.11■□□□□ 0.17
CDCA3-207ENST00000538862 C2orf69Q8N8R5 385 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 RIC8AQ9NPQ8 531 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDCA3-207ENST00000538862 FZD1Q9UP38 647 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 SUGT1Q9Y2Z0 365 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 PNMA6FA0A0J9YX94 578 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 SLC37A4O43826 429 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 EHHADHQ08426 723 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 PRKG1Q13976 671 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 SEPT2Q15019 361 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 MAP9Q49MG5 647 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 TMEM119Q4V9L6 283 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 TRIM58Q8NG06 486 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 SECISBP2LQ93073 1101 aaKnown RBP16.11■□□□□ 0.17
CDCA3-207ENST00000538862 COA7Q96BR5 231 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 EDEM3Q9BZQ6 932 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 DEFB129Q9H1M3 183 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 DAGLAQ9Y4D2 1042 aa16.11■□□□□ 0.17
CDCA3-207ENST00000538862 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
CDCA3-207ENST00000538862 AOC2O75106 756 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 TDP2O95551 362 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 CACNB3P54284 484 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 IQCEQ6IPM2 695 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 HPS3Q969F9 1004 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 TEKT1Q969V4 418 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 SUGCTQ9HAC7 445 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 ZNF70Q9UC06 446 aaPredicted RBP16.1■□□□□ 0.17
CDCA3-207ENST00000538862 SWAP70Q9UH65 585 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 TFR2Q9UP52 801 aa16.1■□□□□ 0.17
CDCA3-207ENST00000538862 TTLL1O95922 423 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 PRLRP16471 622 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
CDCA3-207ENST00000538862 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
CDCA3-207ENST00000538862 FAM71BQ8TC56 605 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 SNX29Q8TEQ0 813 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 TSG101Q99816 390 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 MED4Q9NPJ6 270 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 JRKLQ9Y4A0 524 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 TCP10L2B9ZVM9 353 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 1169.7 ms