RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SYT2Q8N9I0 419 aaPredicted RBP16.49■□□□□ 0.23
ATL3-203ENST00000538786 KLRG1Q96E93 195 aa16.49■□□□□ 0.23
ATL3-203ENST00000538786 PPP1R13BQ96KQ4 1090 aa16.49■□□□□ 0.23
ATL3-203ENST00000538786 EIF2AK1Q9BQI3 630 aaKnown RBP16.49■□□□□ 0.23
ATL3-203ENST00000538786 CTDP1Q9Y5B0 961 aaPredicted RBP16.49■□□□□ 0.23
ATL3-203ENST00000538786 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 A0A1W2PQC6 194 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 FRMD3A2A2Y4 597 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 EML1O00423 815 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 MFAP3LO75121 409 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 GYPCP04921 128 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 TPM1P09493 284 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 SUPT20HL1Q3ZLR7 823 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 ARSHQ5FYA8 562 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 KRT26Q7Z3Y9 468 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 MB21D1Q8N884 522 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 ZNF507Q8TCN5 953 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 CCDC51Q96ER9 411 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 C12orf42Q96LP6 360 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 HSD17B14Q9BPX1 270 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 WDR11Q9BZH6 1224 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 TUFT1Q9NNX1 390 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 COL20A1Q9P218 1284 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 ZHX2Q9Y6X8 837 aa16.48■□□□□ 0.23
ATL3-203ENST00000538786 C19orf81C9J6K1 198 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 KIF2AO00139 706 aaPredicted RBP16.47■□□□□ 0.23
ATL3-203ENST00000538786 GAS7O60861 476 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 FGFR1OPO95684 399 aaKnown RBP16.47■□□□□ 0.23
ATL3-203ENST00000538786 KRT18P05783 430 aaKnown RBP16.47■□□□□ 0.23
ATL3-203ENST00000538786 PSMC6P62333 389 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 CEP135Q66GS9 1140 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 MYOCDQ8IZQ8 938 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 CNOT6LQ96LI5 555 aaKnown RBP16.47■□□□□ 0.23
ATL3-203ENST00000538786 MXRA8Q9BRK3 442 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 TUBGCP2Q9BSJ2 902 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 ZNF577Q9BSK1 485 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 NAA15Q9BXJ9 866 aaKnown RBP16.47■□□□□ 0.23
ATL3-203ENST00000538786 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
ATL3-203ENST00000538786 PCDHA2Q9Y5H9 948 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 VWA5AO00534 786 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 BCRP11274 1271 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 CASP14P31944 242 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 DNM2P50570 870 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 CYP4A11Q02928 519 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.232e-16■□□□□ 11
ATL3-203ENST00000538786 MUM1L1Q5H9M0 696 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
ATL3-203ENST00000538786 NIPA1Q7RTP0 329 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 MYRIPQ8NFW9 859 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 CPLX3Q8WVH0 158 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 RIT2Q99578 217 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 TSG101Q99816 390 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 PAXBP1Q9Y5B6 917 aa16.47■□□□□ 0.23
ATL3-203ENST00000538786 SMCHD1A6NHR9 2005 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 UQCRHLA0A096LP55 91 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 NPHP3-ACAD11A0A0J9YXS1 232 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 EYA4O95677 639 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 UQCRHP07919 91 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 ARP10275 920 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 MUTP22033 750 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 LRRC41Q15345 812 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 HERC4Q5GLZ8 1057 aaPredicted RBP16.46■□□□□ 0.23
ATL3-203ENST00000538786 GLIS3Q8NEA6 775 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 SYTL5Q8TDW5 730 aaPredicted RBP16.46■□□□□ 0.23
ATL3-203ENST00000538786 HOMER2Q9NSB8 354 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 RGL1Q9NZL6 768 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 FZD1Q9UP38 647 aa16.46■□□□□ 0.23
ATL3-203ENST00000538786 IPO5O00410 1097 aaKnown RBP16.45■□□□□ 0.22
ATL3-203ENST00000538786 ZSCAN12O43309 604 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 KIF20AO95235 890 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 TUBB4AP04350 444 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 ITGB5P18084 799 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATL3-203ENST00000538786 HMGCS2P54868 508 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 GIT2Q14161 759 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 PCNX4Q63HM2 1172 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 ATG4CQ96DT6 458 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 FRMPD4Q14CM0 1322 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 B4DLN1 442 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 CHMP2AO43633 222 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 SLITRK3O94933 977 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 FECHP22830 423 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 MTIF2P46199 727 aaKnown RBP16.45■□□□□ 0.22
ATL3-203ENST00000538786 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
ATL3-203ENST00000538786 B3GNT9Q6UX72 402 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 TEKT3Q9BXF9 490 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 BHMT2Q9H2M3 363 aa16.45■□□□□ 0.22
ATL3-203ENST00000538786 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
ATL3-203ENST00000538786 PES1O00541 588 aaKnown RBP16.44■□□□□ 0.22
ATL3-203ENST00000538786 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
ATL3-203ENST00000538786 OAZ1P54368 228 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 RAD51AP2Q09MP3 1159 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 CTTNQ14247 550 aaKnown RBP16.44■□□□□ 0.22
ATL3-203ENST00000538786 ZCWPW2Q504Y3 356 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 MIIPQ5JXC2 388 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 LRRC55Q6ZSA7 311 aa16.44■□□□□ 0.22
ATL3-203ENST00000538786 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms