RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 TRIM71Q2Q1W2 868 aaKnown RBP17.13■□□□□ 0.33
LRRK1-211ENST00000538064 WWC2Q6AWC2 1192 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 CYFIP1Q7L576 1253 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
LRRK1-211ENST00000538064 GPRASP2Q96D09 838 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 GPR20Q99678 358 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
LRRK1-211ENST00000538064 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 PCDHA11Q9Y5I1 949 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 CUL9Q8IWT3 2517 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 H3BRB1 525 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 CXCL10P02778 98 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 RABGGTBP53611 331 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 HIC1Q14526 733 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-211ENST00000538064 WNT8BQ93098 351 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 CDHR1Q96JP9 859 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 TUT1Q9H6E5 874 aaKnown RBP17.12■□□□□ 0.33
LRRK1-211ENST00000538064 SLC28A3Q9HAS3 691 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 COL4A4P53420 1690 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-211ENST00000538064 NID2Q14112 1375 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 SIP14410 1827 aa17.12■□□□□ 0.33
LRRK1-211ENST00000538064 C17orf102A2RUQ5 167 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 HSPA4P34932 840 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 ZNF200P98182 395 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-211ENST00000538064 GPNMBQ14956 572 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 PPP2R2DQ66LE6 453 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 TRAF7Q6Q0C0 670 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 SERINC5Q86VE9 423 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 GIMAP8Q8ND71 665 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-211ENST00000538064 PHOSPHO2Q8TCD6 241 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 GAS2L1Q99501 681 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-211ENST00000538064 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 EHMT1Q9H9B1 1298 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 ZNF215Q9UL58 517 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-211ENST00000538064 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 CHD7Q9P2D1 2997 aa17.11■□□□□ 0.33
LRRK1-211ENST00000538064 NBNO60934 754 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 SMIM10L2AP0DMW4 78 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 SMIM10L2BP0DMW5 78 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 KCNA2P16389 499 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 ITGB5P18084 799 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 NAPAP54920 295 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 TYW1BQ6NUM6 668 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 CNKSR3Q6P9H4 555 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 TRIM50Q86XT4 487 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
LRRK1-211ENST00000538064 PRDM12Q9H4Q4 367 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 RIC8AQ9NPQ8 531 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
LRRK1-211ENST00000538064 UBIAD1Q9Y5Z9 338 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
LRRK1-211ENST00000538064 STXBP3O00186 592 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 REC8O95072 547 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 MYOGP15173 224 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 KCNJ6P48051 423 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 FGD1P98174 961 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 MTMR1Q13613 665 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 ZNF618Q5T7W0 954 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 JADE2Q9NQC1 790 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 TELO2Q9Y4R8 837 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
LRRK1-211ENST00000538064 EMSYQ7Z589 1322 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 DLL1O00548 723 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 CAND2O75155 1236 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 CPA1P15085 419 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 CDC27P30260 824 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.32
LRRK1-211ENST00000538064 ADCY7P51828 1080 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 WDR5P61964 334 aaKnown RBP17.08■□□□□ 0.32
LRRK1-211ENST00000538064 SP4Q02446 784 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 MBTPS1Q14703 1052 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 Q6ZUG5 572 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 FBXL16Q8N461 479 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 ATP6V0A1Q93050 837 aa17.08■□□□□ 0.32
LRRK1-211ENST00000538064 V9GY48 417 aaPredicted RBP17.08■□□□□ 0.32
LRRK1-211ENST00000538064 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 CCDC196A0A1B0GTZ2 297 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 MAFGO15525 162 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 TREHO43280 583 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 ATP9AO75110 1047 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 CA3P07451 260 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 THPOP40225 353 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 AP3B2Q13367 1082 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 UTP14CQ5TAP6 766 aaKnown RBP17.07■□□□□ 0.32
LRRK1-211ENST00000538064 USP38Q8NB14 1042 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 AGXT2Q9BYV1 514 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 GLT8D2Q9H1C3 349 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms