RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CYLC1P35663 651 aaPredicted RBP11.69□□□□□ -0.54
RTN3-208ENST00000537981 BPIFB4P59827 614 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 TIMM10P62072 90 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 SLMAPQ14BN4 828 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 KRT71Q3SY84 523 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 KLHL29Q96CT2 875 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 BICD1Q96G01 975 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 PRMT1Q99873 361 aaKnown RBP11.69□□□□□ -0.54
RTN3-208ENST00000537981 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 GOLPH3Q9H4A6 298 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 PCDHA13Q9Y5I0 950 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 LUC7L3O95232 432 aaKnown RBP11.69□□□□□ -0.54
RTN3-208ENST00000537981 IGKV5-2P06315 115 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 GSTA1P08263 222 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 ETS2P15036 469 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 ALDH1B1P30837 517 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 PRCPP42785 496 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 PAFAH1B1P43034 410 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 RAD23BP54727 409 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 TRIM14Q14142 442 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 ACBD5Q5T8D3 534 aaPredicted RBP11.69□□□□□ -0.54
RTN3-208ENST00000537981 TAX1BP1Q86VP1 789 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 SHISA4Q96DD7 197 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 NDNQ99608 321 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 SELENOSQ9BQE4 189 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 PAG1Q9NWQ8 432 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 ANKIB1Q9P2G1 1089 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 FMN2Q9NZ56 1722 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 DIP2AQ14689 1571 aa11.69□□□□□ -0.54
RTN3-208ENST00000537981 CFAP73A6NFT4 308 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 ATF3P18847 181 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 ITGA6P23229 1130 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 PAK1Q13153 545 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 C1orf131Q8NDD1 294 aaKnown RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 RUBCNQ92622 972 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 P3H4Q92791 437 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 NUTM2BA6NNL0 878 aaPredicted RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 LGALS16A8MUM7 142 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 NUTM2EB1AL46 878 aaPredicted RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 MFSD4BQ5TF39 518 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 WHAMMQ8TF30 809 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 GLMNQ92990 594 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 NEUROD6Q96NK8 337 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 UBAC1Q9BSL1 405 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 CABP5Q9NP86 173 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 ZNF510Q9Y2H8 683 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 SRPRBQ9Y5M8 271 aaKnown RBP11.68□□□□□ -0.54
RTN3-208ENST00000537981 MRC1P22897 1456 aa11.68□□□□□ -0.54
RTN3-208ENST00000537981 CYP1A1P04798 512 aaPredicted RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 VIMP08670 466 aaKnown RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 TCP1P17987 556 aaKnown RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 CCNG1P51959 295 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 IFI35P80217 286 aaPredicted RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 GFPT1Q06210 699 aaPredicted RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 MPP3Q13368 585 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 DNAAF5Q86Y56 855 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 FGD4Q96M96 766 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 DDX50Q9BQ39 737 aaKnown RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 LRRC42Q9Y546 428 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 NPHP3-ACAD11A0A0J9YXS1 232 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 FOXO6A8MYZ6 492 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 CAPN15O75808 1086 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 EIF4A3P38919 411 aaKnown RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 LRRC14Q15048 493 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 APOA5Q6Q788 366 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 FITM2Q8N6M3 262 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 ANKS4BQ8N8V4 417 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 TTC8Q8TAM2 541 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 SPACA7Q96KW9 195 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 AP1M1Q9BXS5 423 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 MOV10L1Q9BXT6 1211 aaKnown RBP11.67□□□□□ -0.54
RTN3-208ENST00000537981 ZWILCHQ9H900 591 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 MLXIPLQ9NP71 852 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 ARHGEF3Q9NR81 526 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 SLAIN2Q9P270 581 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 ANAPC4Q9UJX5 808 aa11.67□□□□□ -0.54
RTN3-208ENST00000537981 PEX11AO75192 247 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 IGHMBP2P38935 993 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 CCNFP41002 786 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 IARSP41252 1262 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 SLC1A4P43007 532 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 KIF11P52732 1056 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 GALNTL6Q49A17 601 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 CFAP221Q4G0U5 840 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 UHMK1Q8TAS1 419 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 RMDN2Q96LZ7 410 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 METTL14Q9HCE5 456 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 RWDD2AQ9UIY3 292 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms