RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MKL2Q9ULH7 1088 aa6.11□□□□□ -1.43
CSMD1-215ENST00000537824 ZNF148Q9UQR1 794 aa6.11□□□□□ -1.43
CSMD1-215ENST00000537824 NDUFA10O95299 355 aa6.11□□□□□ -1.43
CSMD1-215ENST00000537824 AGGF1Q8N302 714 aaeCLIP6.11□□□□□ -1.432e-8■■■■■ 37.2
CSMD1-215ENST00000537824 BRD8Q9H0E9 1235 aa6.11□□□□□ -1.43
CSMD1-215ENST00000537824 CARD9Q9H257 536 aa6.11□□□□□ -1.43
CSMD1-215ENST00000537824 C19orf44Q9H6X5 657 aa6.11□□□□□ -1.43
CSMD1-215ENST00000537824 HPCAL4Q9UM19 191 aa6.11□□□□□ -1.43
CSMD1-215ENST00000537824 DLGAP3O95886 979 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TRHP20396 242 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 MYCT1Q8N699 235 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CNOT6LQ96LI5 555 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ADA2Q9NZK5 511 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 BZW2Q9Y6E2 419 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 POLR3AO14802 1390 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ZMYM6O95789 1325 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 SMTNP53814 917 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 GSTO1P78417 241 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 GPC4O75487 556 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 FBLN1P23142 703 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 STX1BP61266 288 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 MYOCDQ8IZQ8 938 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CYGBQ8WWM9 190 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 PSPC1Q8WXF1 523 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TEKT2Q9UIF3 430 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ATAD2BQ9ULI0 1458 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TROQ12816 1431 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CTIFO43310 598 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 EXOC3O60645 756 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 NBNO60934 754 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 BBS9Q3SYG4 887 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 C10orf76Q5T2E6 689 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 SPOPLQ6IQ16 392 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 PLD3Q8IV08 490 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CFAP69A5D8W1 941 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 HNRNPCL2B2RXH8 293 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 H0YC42 278 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 HNRNPCL1O60812 293 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 MBD4O95243 580 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 XRCC5P13010 732 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 PDE1BQ01064 536 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 NR1H3Q13133 447 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 APLFQ8IW19 511 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 SEC16BQ96JE7 1060 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ARMCX3Q9UH62 379 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 IQGAP2Q13576 1575 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 IRAK1P51617 712 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 LRRC36Q1X8D7 754 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 DAB2IPQ5VWQ8 1189 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 FAM133AQ8N9E0 248 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TMEM87BQ96K49 555 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 MLXIPQ9HAP2 919 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CCDC61Q9Y6R9 512 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 DEAF1O75398 565 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TMPRSS15P98073 1019 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 DZIP3Q86Y13 1208 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TUBGCP2Q9BSJ2 902 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 GGT7Q9UJ14 662 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ABCC5O15440 1437 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 PRAG1Q86YV5 1406 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 SNAPC4Q5SXM2 1469 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 LOXHD1Q8IVV2 1947 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 XPO1O14980 1071 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ERFP50548 548 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 PTH1RQ03431 593 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CEP78Q5JTW2 689 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 HOOK2Q96ED9 719 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TRIM11Q96F44 468 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 FNBP1Q96RU3 617 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ARL2BPQ9Y2Y0 163 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TOM1O60784 492 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 PALMO75781 387 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TMOD1P28289 359 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 TRPM8Q7Z2W7 1104 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CABP7Q86V35 215 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 SAYSD1Q9NPB0 183 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CAND2O75155 1236 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CD19P15391 556 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 SCRN1Q12765 414 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 FOXD4Q12950 439 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 HEATR4Q86WZ0 1026 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 SIX5Q8N196 739 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 KIF26BQ2KJY2 2108 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ZBTB7BO15156 539 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 GRK2P25098 689 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
CSMD1-215ENST00000537824 GPBP1Q86WP2 473 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 CATSPER3Q86XQ3 398 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 RNF14Q9UBS8 474 aa6.1□□□□□ -1.43
CSMD1-215ENST00000537824 STAM2O75886 525 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CCDC144BQ3MJ40 725 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ANKRD13DQ6ZTN6 518 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 RNF34Q969K3 372 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.09□□□□□ -1.43
CSMD1-215ENST00000537824 SYNJ2O15056 1496 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 IKBKBO14920 756 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 NCK2O43639 380 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 LDHCP07864 332 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 FAM200BP0CF97 657 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 COPB2P35606 906 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms