RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 KCNA4P22459 653 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 HOXA7P31268 230 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 GUCY1A2P33402 732 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PAFAH1B1P43034 410 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 VAV2P52735 878 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 HERVK_113P62684 666 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 ATP2C1P98194 919 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 NR5A1Q13285 461 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 RASA3Q14644 834 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 KCNB1Q14721 858 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PLCB4Q15147 1175 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 DLGAP5Q15398 846 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 FIGNQ5HY92 759 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 TTC38Q5R3I4 469 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 USP49Q70CQ1 688 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 SND1Q7KZF4 910 aaKnown RBP eCLIP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 ANKRD18AQ8IVF6 992 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 TEX2Q8IWB9 1127 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 OTUD6BQ8N6M0 293 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 BCAS4Q8TDM0 211 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 MYLIPQ8WY64 445 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 SECISBP2LQ93073 1101 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 CAVIN3Q969G5 261 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PRMT6Q96LA8 375 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 ALS2CR12Q96Q35 445 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PURBQ96QR8 312 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 SH3GL2Q99962 352 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PAGR1Q9BTK6 254 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PHF20Q9BVI0 1012 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 PIH1D3Q9NQM4 214 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 GNL3LQ9NVN8 582 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 RNF14Q9UBS8 474 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 GGA2Q9UJY4 613 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 REXO2Q9Y3B8 237 aaKnown RBP8.62□□□□□ -1.03
CPSF7-216ENST00000536548 HYOU1Q9Y4L1 999 aa8.62□□□□□ -1.03
CPSF7-216ENST00000536548 ZNF804BA4D1E1 1349 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 A0A087X0B3 334 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 TCRBV5S4A2TA0A5A2 114 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 TTC26A0AVF1 554 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 BICDL2A1A5D9 508 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 H0YHG0 523 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 AGPSO00116 658 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 PSMA7O14818 248 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 KIF1CO43896 1103 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 FSBPO95073 299 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 MBD4O95243 580 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 RPN1P04843 607 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 INHAP05111 366 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 PCP11498 1178 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 ATP2B4P23634 1241 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 HOXD10P28358 340 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 RDXP35241 583 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 LONP1P36776 959 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 TDO2P48775 406 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 LIG3P49916 1009 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 MNAT1P51948 309 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 GSCP56915 257 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 GTF2IP78347 998 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 ZBED6P86452 979 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 DRP2Q13474 957 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 E2F4Q16254 413 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 TJAP1Q5JTD0 557 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 FKBP15Q5T1M5 1219 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 ZNF697Q5TEC3 545 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CCDC181Q5TID7 509 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 ARL6IP4Q66PJ3 421 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 LDHAL6AQ6ZMR3 332 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 YTHDF3Q7Z739 585 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CATIPQ7Z7H3 387 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CERS3Q8IU89 383 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 ZBTB38Q8NAP3 1195 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 C1orf131Q8NDD1 294 aaKnown RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 ESR2Q92731 530 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 EPSTI1Q96J88 318 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CABS1Q96KC9 395 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CAPZA3Q96KX2 299 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 SNX27Q96L92 541 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CHP1Q99653 195 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 SEMA6BQ9H3T3 888 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 MAGEF1Q9HAY2 307 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 PAK6Q9NQU5 681 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 CNNM1Q9NRU3 951 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 TOMM22Q9NS69 142 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 EXOC1Q9NV70 894 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 RNF216Q9NWF9 866 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 SNX12Q9UMY4 172 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 PPP2R3BQ9Y5P8 575 aa8.61□□□□□ -1.03
CPSF7-216ENST00000536548 COL2A1P02458 1487 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-216ENST00000536548 DDX60LQ5H9U9 1706 aaKnown RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 TMCO5BA8MYB1 307 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 F8W031 263 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 NDUFAB1O14561 156 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 ADCY3O60266 1144 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 DDAH1O94760 285 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 SLC5A1P13866 664 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 KLRK1P26718 216 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms