RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 DAGLBQ8NCG7 672 aa25.3■■□□□ 1.64
VPS37C-202ENST00000535818 CYP2W1Q8TAV3 490 aa25.3■■□□□ 1.64
VPS37C-202ENST00000535818 TRIM43Q96BQ3 446 aaPredicted RBP25.3■■□□□ 1.64
VPS37C-202ENST00000535818 BACH2Q9BYV9 841 aa25.3■■□□□ 1.64
VPS37C-202ENST00000535818 KCNH7Q9NS40 1196 aa25.3■■□□□ 1.64
VPS37C-202ENST00000535818 COLQQ9Y215 455 aaPredicted RBP25.3■■□□□ 1.64
VPS37C-202ENST00000535818 SCN10AQ9Y5Y9 1956 aa25.3■■□□□ 1.64
VPS37C-202ENST00000535818 CEP290O15078 2479 aa25.3■■□□□ 1.64
VPS37C-202ENST00000535818 JAK2O60674 1132 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 CYP3A4P08684 503 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 HOXD8P13378 290 aaPredicted RBP25.29■■□□□ 1.64
VPS37C-202ENST00000535818 RAG1P15918 1043 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 ST3GAL1Q11201 340 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 NFRKBQ6P4R8 1299 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 PLA2G4DQ86XP0 818 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 PPP1R13LQ8WUF5 828 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 PHF20Q9BVI0 1012 aa25.29■■□□□ 1.64
VPS37C-202ENST00000535818 KIAA0355O15063 1070 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 B4GALT4O60513 344 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 F2P00734 622 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 ARP10275 920 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 FDPSP14324 419 aaKnown RBP25.28■■□□□ 1.64
VPS37C-202ENST00000535818 PSEN2P49810 448 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 MFSD10Q14728 455 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 NIPA1Q7RTP0 329 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 CRYGNQ8WXF5 182 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 KAT2BQ92831 832 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 GPR20Q99678 358 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 GDF15Q99988 308 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 SDF4Q9BRK5 362 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 TRPV6Q9H1D0 765 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 LTBP2Q14767 1821 aa25.28■■□□□ 1.64
VPS37C-202ENST00000535818 DNAH12Q6ZR08 3092 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 FAM86B1E9PN63 330 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 MEIS1O00470 390 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 CD4P01730 458 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 LGALS2P05162 132 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 FAM86B2P0C5J1 330 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 SETQ01105 290 aaPredicted RBP25.27■■□□□ 1.64
VPS37C-202ENST00000535818 PTPN11Q06124 597 aaPredicted RBP25.27■■□□□ 1.64
VPS37C-202ENST00000535818 GJB4Q9NTQ9 266 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 TBX21Q9UL17 535 aa25.27■■□□□ 1.64
VPS37C-202ENST00000535818 SUPT20HL2P0C7V6 817 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 FOSBP53539 338 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 TRIM29Q14134 588 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 NPY5RQ15761 445 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 KIAA0753Q2KHM9 967 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 UTP14CQ5TAP6 766 aaKnown RBP25.26■■□□□ 1.63
VPS37C-202ENST00000535818 KRT25Q7Z3Z0 450 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 C7orf31Q8N865 590 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 TBCKQ8TEA7 893 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 BADQ92934 168 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 UBE2OQ9C0C9 1292 aaKnown RBP25.26■■□□□ 1.63
VPS37C-202ENST00000535818 AGO4Q9HCK5 861 aaKnown RBP25.26■■□□□ 1.63
VPS37C-202ENST00000535818 BRMS1Q9HCU9 246 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 JPH1Q9HDC5 661 aaPredicted RBP25.26■■□□□ 1.63
VPS37C-202ENST00000535818 NOD1Q9Y239 953 aa25.26■■□□□ 1.63
VPS37C-202ENST00000535818 CCDC194A0A1B0GVG4 234 aa25.25■■□□□ 1.63
VPS37C-202ENST00000535818 NONOQ15233 471 aaKnown RBP eCLIP25.25■■□□□ 1.637e-8■■■■■ 28.3
VPS37C-202ENST00000535818 LLPHQ9BRT6 129 aaKnown RBP25.25■■□□□ 1.63
VPS37C-202ENST00000535818 PPP1R12CQ9BZL4 782 aa25.25■■□□□ 1.63
VPS37C-202ENST00000535818 TRMT13Q9NUP7 481 aaKnown RBP25.25■■□□□ 1.63
VPS37C-202ENST00000535818 SLC9A2Q9UBY0 812 aa25.25■■□□□ 1.63
VPS37C-202ENST00000535818 NFASCO94856 1347 aa25.25■■□□□ 1.63
VPS37C-202ENST00000535818 IGLV3-22A0A075B6J6 115 aa25.24■■□□□ 1.63
VPS37C-202ENST00000535818 M0R2N6 131 aa25.24■■□□□ 1.63
VPS37C-202ENST00000535818 TCF7P36402 384 aaPredicted RBP25.24■■□□□ 1.63
VPS37C-202ENST00000535818 USP11P51784 963 aa25.24■■□□□ 1.63
VPS37C-202ENST00000535818 PRR16Q569H4 304 aa25.24■■□□□ 1.63
VPS37C-202ENST00000535818 SEPT1Q8WYJ6 367 aa25.24■■□□□ 1.63
VPS37C-202ENST00000535818 C16orf70Q9BSU1 422 aa25.24■■□□□ 1.63
VPS37C-202ENST00000535818 ZNF215Q9UL58 517 aaPredicted RBP25.24■■□□□ 1.63
VPS37C-202ENST00000535818 TELO2Q9Y4R8 837 aa25.24■■□□□ 1.63
VPS37C-202ENST00000535818 H3BRB1 525 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 HAS3O00219 553 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 TIMP1P01033 207 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 ITGB8P26012 769 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 CIITAP33076 1130 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 BMP8BP34820 402 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 KRT2P35908 639 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 ZNF577Q9BSK1 485 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 PRO3102Q9H379 93 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 HIPK3Q9H422 1215 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 TUT1Q9H6E5 874 aaKnown RBP25.23■■□□□ 1.63
VPS37C-202ENST00000535818 HDAC6Q9UBN7 1215 aa25.23■■□□□ 1.63
VPS37C-202ENST00000535818 DDX39AO00148 427 aaKnown RBP25.22■■□□□ 1.63
VPS37C-202ENST00000535818 HMGN5P82970 282 aaKnown RBP25.22■■□□□ 1.63
VPS37C-202ENST00000535818 ITGB3BPQ13352 177 aaPredicted RBP25.22■■□□□ 1.63
VPS37C-202ENST00000535818 SESTD1Q86VW0 696 aa25.22■■□□□ 1.63
VPS37C-202ENST00000535818 TRIM50Q86XT4 487 aa25.22■■□□□ 1.63
VPS37C-202ENST00000535818 FAM184AQ8NB25 1140 aa25.22■■□□□ 1.63
VPS37C-202ENST00000535818 UIMC1Q96RL1 719 aa25.22■■□□□ 1.63
VPS37C-202ENST00000535818 GTF2IRD1Q9UHL9 959 aa25.22■■□□□ 1.63
VPS37C-202ENST00000535818 TCEAL9Q9UHQ7 104 aa25.22■■□□□ 1.63
VPS37C-202ENST00000535818 IPO5O00410 1097 aaKnown RBP25.21■■□□□ 1.63
VPS37C-202ENST00000535818 CYP2C9P11712 490 aa25.21■■□□□ 1.63
VPS37C-202ENST00000535818 MCM2P49736 904 aa25.21■■□□□ 1.63
VPS37C-202ENST00000535818 PTGISQ16647 500 aa25.21■■□□□ 1.63
VPS37C-202ENST00000535818 INF2Q27J81 1249 aa25.21■■□□□ 1.63
VPS37C-202ENST00000535818 HABP4Q5JVS0 413 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 447 ms