RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 INPP4AQ96PE3 977 aaPredicted RBP10.18□□□□□ -0.78
CHD4-204ENST00000535810 WNT8AQ9H1J5 351 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 PSTPIP2Q9H939 334 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
CHD4-204ENST00000535810 EPB41L2O43491 1005 aaKnown RBP10.17□□□□□ -0.78
CHD4-204ENST00000535810 STAM2O75886 525 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 GGPS1O95749 300 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 F2P00734 622 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 SUPT20HL2P0C7V6 817 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 TGFB3P10600 412 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 CYP2C9P11712 490 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 HOXD8P13378 290 aaPredicted RBP10.17□□□□□ -0.78
CHD4-204ENST00000535810 CASTP20810 708 aaKnown RBP10.17□□□□□ -0.78
CHD4-204ENST00000535810 RPS6KB1P23443 525 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 FGD1P98174 961 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 DGKDQ16760 1214 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 GNPTABQ3T906 1256 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 FAM47CQ5HY64 1035 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 TJAP1Q5JTD0 557 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 CELF3Q5SZQ8 465 aaKnown RBP10.17□□□□□ -0.78
CHD4-204ENST00000535810 MYSM1Q5VVJ2 828 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 PCNX4Q63HM2 1172 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 WWC2Q6AWC2 1192 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 BLOC1S2Q6QNY1 142 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 Q6ZUG5 572 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 DHX37Q8IY37 1157 aaKnown RBP10.17□□□□□ -0.78
CHD4-204ENST00000535810 FBXL16Q8N461 479 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 SPATA33Q96N06 139 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.17□□□□□ -0.782e-7■□□□□ 9.9
CHD4-204ENST00000535810 SEMA6BQ9H3T3 888 aa10.17□□□□□ -0.78
CHD4-204ENST00000535810 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
CHD4-204ENST00000535810 NID2Q14112 1375 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 CHD9Q3L8U1 2897 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 SPATA31C2B4DYI2 1134 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 SORBS3O60504 671 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 ZNF286BP0CG31 522 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 ACRP10323 421 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 CDC27P30260 824 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 ICAM3P32942 547 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHD4-204ENST00000535810 CCL23P55773 120 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 CHMP4BP1P59074 171 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 SMAD3P84022 425 aaKnown RBP10.16□□□□□ -0.78
CHD4-204ENST00000535810 PTPN11Q06124 597 aaPredicted RBP10.16□□□□□ -0.78
CHD4-204ENST00000535810 APOBRQ0VD83 1088 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 SEMA3FQ13275 785 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 UBE2SQ16763 222 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 HSDL1Q3SXM5 330 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 TMEM240Q5SV17 173 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 PPP1R18Q6NYC8 613 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 XRRA1Q6P2D8 792 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 PSRC1Q6PGN9 363 aaPredicted RBP10.16□□□□□ -0.78
CHD4-204ENST00000535810 SESTD1Q86VW0 696 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 BRF1Q92994 677 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 CTAGE1Q96RT6 745 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 AGXT2Q9BYV1 514 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 IL23AQ9NPF7 189 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 RTEL1Q9NZ71 1219 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 RAPGEFL1Q9UHV5 662 aa10.16□□□□□ -0.78
CHD4-204ENST00000535810 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 STXBP3O00186 592 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 HAS3O00219 553 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 FIBPO43427 364 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 PPFIA4O75335 1185 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 PSMA5P28066 241 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 NAPAP54920 295 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 RASIP1Q5U651 963 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 METTL7BQ6UX53 244 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 ZNF365Q70YC5 407 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 VWCEQ96DN2 955 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 KATNAL1Q9BW62 490 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 USP26Q9BXU7 913 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 BCAS3Q9H6U6 928 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 MLXIPQ9HAP2 919 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 NAP1L2Q9ULW6 460 aaPredicted RBP10.15□□□□□ -0.78
CHD4-204ENST00000535810 V9GY48 417 aaPredicted RBP10.15□□□□□ -0.78
CHD4-204ENST00000535810 CHD7Q9P2D1 2997 aa10.15□□□□□ -0.78
CHD4-204ENST00000535810 MYH7BA7E2Y1 1941 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 SPDYE3A6NKU9 549 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 hCG_1984214I3L0E3 225 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
CHD4-204ENST00000535810 ITGB5P18084 799 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
CHD4-204ENST00000535810 PSEN2P49810 448 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 NEDD9Q14511 834 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 PTGISQ16647 500 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 KIAA0753Q2KHM9 967 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 GDF6Q6KF10 455 aaPredicted RBP10.14□□□□□ -0.79
CHD4-204ENST00000535810 ZNF713Q8N859 430 aaPredicted RBP10.14□□□□□ -0.79
CHD4-204ENST00000535810 C7orf31Q8N865 590 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 HERVK_113Q902F9 699 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 GPRASP2Q96D09 838 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 SCLYQ96I15 445 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 SENP7Q9BQF6 1050 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 C16orf70Q9BSU1 422 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 ZSWIM6Q9HCJ5 1215 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 RIC8AQ9NPQ8 531 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 BARHL2Q9NY43 387 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms