RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 WNT8AQ9H1J5 351 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 RIC8AQ9NPQ8 531 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 BARHL2Q9NY43 387 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 DOCK5Q9H7D0 1870 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 PPP1R37O75864 691 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 ACRP10323 421 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 SCG2P13521 617 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 PSEN2P49810 448 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
CDCA3-204ENST00000535406 SEMA3FQ13275 785 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 E2F4Q16254 413 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 PTGISQ16647 500 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 PFKFB3Q16875 520 aaPredicted RBP10.82□□□□□ -0.68
CDCA3-204ENST00000535406 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 METTL7BQ6UX53 244 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 CYFIP1Q7L576 1253 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 DEFB123Q8N688 67 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 C7orf31Q8N865 590 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 GPRASP2Q96D09 838 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 CDHR1Q96JP9 859 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 UPF3BQ9BZI7 483 aaKnown RBP10.82□□□□□ -0.68
CDCA3-204ENST00000535406 TM6SF1Q9BZW5 370 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 GLT8D2Q9H1C3 349 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 IL23AQ9NPF7 189 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 PCDHA6Q9UN73 950 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 PCDHA8Q9Y5H6 950 aa10.82□□□□□ -0.68
CDCA3-204ENST00000535406 SMCO2A6NFE2 343 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 HAS3O00219 553 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 PPFIA4O75335 1185 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 FOSP01100 380 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 ITGB5P18084 799 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 EVCP57679 992 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 CCT2P78371 535 aaKnown RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 SMAD3P84022 425 aaKnown RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 AKAP17AQ02040 695 aaKnown RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 AP3B2Q13367 1082 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 BFSP2Q13515 415 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 MTMR1Q13613 665 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 TOB2Q14106 344 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 TMEM240Q5SV17 173 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 ZNF697Q5TEC3 545 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 GDF6Q6KF10 455 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 Q7L0L9 218 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 CCDC155Q8N6L0 562 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 GIMAP8Q8ND71 665 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 CCDC12Q8WUD4 166 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-204ENST00000535406 PHKBQ93100 1093 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 SCLYQ96I15 445 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 PGBD1Q96JS3 809 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 SENP7Q9BQF6 1050 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 ALG1Q9BT22 464 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 ANO3Q9BYT9 981 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 GTF2IRD1Q9UHL9 959 aa10.81□□□□□ -0.68
CDCA3-204ENST00000535406 ESYT2A0FGR8 921 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 PRPF3O43395 683 aaKnown RBP10.8□□□□□ -0.68
CDCA3-204ENST00000535406 LGALS2P05162 132 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 PFKMP08237 780 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 PDIA3P30101 505 aaKnown RBP10.8□□□□□ -0.68
CDCA3-204ENST00000535406 SP4Q02446 784 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 ZNF365Q70YC5 407 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 C16orf59Q7L2K0 433 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 RPUSD2Q8IZ73 545 aaKnown RBP10.8□□□□□ -0.68
CDCA3-204ENST00000535406 RETREG2Q8NC44 543 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 CAGE1Q8TC20 777 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 GPR20Q99678 358 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 C16orf70Q9BSU1 422 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 RNF26Q9BY78 433 aaPredicted RBP10.8□□□□□ -0.68
CDCA3-204ENST00000535406 MTIF3Q9H2K0 278 aaKnown RBP10.8□□□□□ -0.68
CDCA3-204ENST00000535406 BCAS3Q9H6U6 928 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 NCOA5Q9HCD5 579 aaKnown RBP10.8□□□□□ -0.68
CDCA3-204ENST00000535406 HDAC6Q9UBN7 1215 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 UBIAD1Q9Y5Z9 338 aa10.8□□□□□ -0.68
CDCA3-204ENST00000535406 SCN5AQ14524 2016 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 H3BRB1 525 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 CPLX1O14810 134 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
CDCA3-204ENST00000535406 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 FGBP02675 491 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 KCNA2P16389 499 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 IFNAR1P17181 557 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 RFC2P35250 354 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 SREBF1P36956 1147 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 CLK2P49760 499 aaKnown RBP10.79□□□□□ -0.68
CDCA3-204ENST00000535406 ANAPC15P60006 121 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 NTRK3Q16288 839 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 PKN1Q16512 942 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
CDCA3-204ENST00000535406 OTOP2Q7RTS6 562 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 DEFB128Q7Z7B8 93 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 REXO1Q8N1G1 1221 aaKnown RBP10.79□□□□□ -0.68
CDCA3-204ENST00000535406 CCDC148Q8NFR7 591 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 HERVK_113Q902F9 699 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 ZNF274Q96GC6 653 aaPredicted RBP10.79□□□□□ -0.68
CDCA3-204ENST00000535406 CTAGE1Q96RT6 745 aa10.79□□□□□ -0.68
CDCA3-204ENST00000535406 ZMYND12Q9H0C1 365 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms