RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ZSCAN26Q16670 478 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 HSPH1Q92598 858 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 PPP1R13BQ96KQ4 1090 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPG11-203ENST00000535302 UBE2TQ9NPD8 197 aaPredicted RBP13.69□□□□□ -0.22
SPG11-203ENST00000535302 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 MFAP3P55082 362 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 UBE3CQ15386 1083 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 CCDC138Q96M89 665 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 NR1H4Q96RI1 486 aaPredicted RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 PFDN1O60925 122 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 H2AFZP0C0S5 128 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 ASPHQ12797 758 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 MIS18BP1Q6P0N0 1132 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 H2AFVQ71UI9 128 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 NSUN7Q8NE18 718 aaKnown RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 MAP4K1Q92918 833 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 ZNF277Q9NRM2 450 aaPredicted RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 MAN1B1Q9UKM7 699 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 LRFN2Q9ULH4 789 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 PCDHB6Q9Y5E3 794 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 EPN1Q9Y6I3 576 aaPredicted RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 TTC4O95801 387 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 CYP2D6P10635 497 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 EIF2AK2P19525 551 aaKnown RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 NLGN1Q8N2Q7 840 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 SOWAHDA6NJG2 315 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 SLC7A5Q01650 507 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 KCTD17Q8N5Z5 321 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 PLXNC1O60486 1568 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 N4BP1O75113 896 aaKnown RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 RNF8O76064 485 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 GAS2L3Q86XJ1 694 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 OSBPP22059 807 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 IFT88Q13099 833 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 SUSD4Q5VX71 490 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 KRT26Q7Z3Y9 468 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 CCDC51Q96ER9 411 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 ZNF668Q96K58 619 aaPredicted RBP13.68□□□□□ -0.22
SPG11-203ENST00000535302 CAPS2Q9BXY5 557 aa13.68□□□□□ -0.22
SPG11-203ENST00000535302 PLEKHA8P1O95397 391 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 CCND2P30279 289 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 ARHGAP25P42331 645 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 STAT2P52630 851 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 PTK2Q05397 1052 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 SYDE2Q5VT97 1194 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
SPG11-203ENST00000535302 GOLGA5Q8TBA6 731 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 NT5C1BQ96P26 610 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 RGS12O14924 1447 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 GOLGA8CPA6NN73 597 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 C21orf2O43822 256 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 MAP2K2P36507 400 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 FAM180AQ6UWF9 173 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 SNX25Q9H3E2 840 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 ZSWIM5Q9P217 1185 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 PI4K2BG5E9Z4 385 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 H3BRJ5 948 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 HIP1RO75146 1068 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 ZNF18P17022 549 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 MAPK4P31152 587 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 KCNA1Q09470 495 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 KIAA1841Q6NSI8 718 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 BCAS4Q8TDM0 211 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 KITP10721 976 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 ATP6V1E1P36543 226 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 TFDP1Q14186 410 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 FBXO18Q8NFZ0 1043 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
SPG11-203ENST00000535302 ABT1Q9ULW3 272 aaKnown RBP13.67□□□□□ -0.22
SPG11-203ENST00000535302 GARSP41250 739 aaKnown RBP13.67□□□□□ -0.22
SPG11-203ENST00000535302 TRIM4Q9C037 500 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 AP5M1Q9H0R1 490 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
SPG11-203ENST00000535302 BMP3P12645 472 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 BASP1P80723 227 aaKnown RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 SLITRK6Q9H5Y7 841 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 PSMC2P35998 433 aaKnown RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 YWHAHQ04917 246 aaPredicted RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 TCP11Q8WWU5 503 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 INSRP06213 1382 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
SPG11-203ENST00000535302 RXRBP28702 533 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 HLFQ16534 295 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 CALN1Q9BXU9 219 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 KRT1P04264 644 aa13.66□□□□□ -0.22
SPG11-203ENST00000535302 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms