RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 UBE2TQ9NPD8 197 aaPredicted RBP19.67■□□□□ 0.74
SFSWAP-203ENST00000535236 TRIM42Q8IWZ5 723 aa19.67■□□□□ 0.74
SFSWAP-203ENST00000535236 GDAP1Q8TB36 358 aa19.67■□□□□ 0.74
SFSWAP-203ENST00000535236 PSPC1Q8WXF1 523 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-203ENST00000535236 CAPN7Q9Y6W3 813 aa19.67■□□□□ 0.74
SFSWAP-203ENST00000535236 SPATS2Q86XZ4 545 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-203ENST00000535236 RPF1Q9H9Y2 349 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-203ENST00000535236 ZFYVE16Q7Z3T8 1539 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 PRKAB2O43741 272 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 FAM182BQ5T319 152 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 ATF5Q9Y2D1 282 aaPredicted RBP19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 CDC37Q16543 378 aaPredicted RBP19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 DSTYKQ6XUX3 929 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 RTKN2Q8IZC4 609 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 CALN1Q9BXU9 219 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 PARVGQ9HBI0 331 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 GCNT4Q9P109 453 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 TLK1Q9UKI8 766 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 DAAM1Q9Y4D1 1078 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 PRPSAP2O60256 369 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 ECEL1O95672 775 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 CD58P19256 250 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 MSH2P43246 934 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 SLC12A1Q13621 1099 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 HEXIM2Q96MH2 286 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 PNMA3Q9UL41 463 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 NVLO15381 856 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 USP17L2Q6R6M4 530 aa19.66■□□□□ 0.74
SFSWAP-203ENST00000535236 NPR1P16066 1061 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 CYP21A2P08686 494 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 USP17L8P0C7I0 530 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 SESN3P58005 492 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 BASP1P80723 227 aaKnown RBP19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 POLR3EQ9NVU0 708 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 STAP2Q9UGK3 403 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 GFPT2O94808 682 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 MYL1P05976 194 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 JRKLQ9Y4A0 524 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 RNF123Q5XPI4 1314 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 DDIT3P35638 169 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 INPP1P49441 399 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 DYNLL2Q96FJ2 89 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 HINFPQ9BQA5 517 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 SRGAP2CP0DJJ0 459 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 UBE2SQ16763 222 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 ADCK5Q3MIX3 580 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 SMYD4Q8IYR2 804 aaPredicted RBP19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 MICAL1Q8TDZ2 1067 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 GANCQ8TET4 914 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 NUDCD1Q96RS6 583 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 EMILIN3Q9NT22 766 aa19.65■□□□□ 0.74
SFSWAP-203ENST00000535236 MMP1P03956 469 aa19.64■□□□□ 0.74
SFSWAP-203ENST00000535236 MXI1P50539 228 aa19.64■□□□□ 0.74
SFSWAP-203ENST00000535236 KCNQ4P56696 695 aa19.64■□□□□ 0.74
SFSWAP-203ENST00000535236 TRIM68Q6AZZ1 485 aa19.64■□□□□ 0.74
SFSWAP-203ENST00000535236 LRRC43Q8N309 656 aa19.64■□□□□ 0.74
SFSWAP-203ENST00000535236 ANTXR1Q9H6X2 564 aa19.64■□□□□ 0.74
SFSWAP-203ENST00000535236 F8W8V4 182 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 CDR2Q01850 454 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 GRAPQ13588 217 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 FAM133AQ8N9E0 248 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 INTS9Q9NV88 658 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 PEG3Q9GZU2 1588 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 ERVV-1B6SEH8 477 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 GNGT2O14610 69 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 EIF2AK2P19525 551 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 RBL2Q08999 1139 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 NLRP10Q86W26 655 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 ATG3Q9NT62 314 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 RCN2Q14257 317 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 SEPT2Q15019 361 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 SCARA5Q6ZMJ2 495 aa19.64■□□□□ 0.73
SFSWAP-203ENST00000535236 SUN1O94901 812 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 MYL3P08590 195 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 PLA2G4BP0C869 781 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 ARL13BQ3SXY8 428 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 NSUN7Q8NE18 718 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 MED4Q9NPJ6 270 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 UBN2Q6ZU65 1347 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 ENC1O14682 589 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 PPFIA2O75334 1257 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 MARK3P27448 753 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 SLC35F6Q8N357 371 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 BCAS4Q8TDM0 211 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 MSTO1Q9BUK6 570 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 ABCF3Q9NUQ8 709 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 RC3H1Q5TC82 1133 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 CYP4F22Q6NT55 531 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 FOXP4Q8IVH2 680 aaPredicted RBP19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 PGRMC1O00264 195 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 ALCAMQ13740 583 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 ZSCAN26Q16670 478 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 ARHGEF25Q86VW2 580 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 NLRP4Q96MN2 994 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 BCL2L12Q9HB09 334 aa19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 KDM5AP29375 1690 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-203ENST00000535236 SH2B2O14492 632 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 PRPF3O43395 683 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 BNIP3LO60238 219 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms