RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 PTGISQ16647 500 aa20.47■□□□□ 0.87
CAPRIN1-217ENST00000534825 CDHR1Q96JP9 859 aa20.47■□□□□ 0.87
CAPRIN1-217ENST00000534825 MXRA8Q9BRK3 442 aa20.47■□□□□ 0.87
CAPRIN1-217ENST00000534825 KATNAL1Q9BW62 490 aa20.47■□□□□ 0.87
CAPRIN1-217ENST00000534825 SLC26A6Q9BXS9 759 aa20.47■□□□□ 0.87
CAPRIN1-217ENST00000534825 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
CAPRIN1-217ENST00000534825 IL23AQ9NPF7 189 aa20.47■□□□□ 0.87
CAPRIN1-217ENST00000534825 LGALS2P05162 132 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 SREBF1P36956 1147 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 AKAP17AQ02040 695 aaKnown RBP20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 MTMR1Q13613 665 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 HIC1Q14526 733 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 RASIP1Q5U651 963 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 ZNF365Q70YC5 407 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 C7orf31Q8N865 590 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 GIMAP8Q8ND71 665 aaPredicted RBP20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 CRYGNQ8WXF5 182 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 SCLYQ96I15 445 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 RNPC3Q96LT9 517 aaKnown RBP20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 EHMT1Q9H9B1 1298 aa20.46■□□□□ 0.87
CAPRIN1-217ENST00000534825 H3BRB1 525 aa20.45■□□□□ 0.86
CAPRIN1-217ENST00000534825 TUT1Q9H6E5 874 aaKnown RBP20.45■□□□□ 0.86
CAPRIN1-217ENST00000534825 KCNH7Q9NS40 1196 aa20.45■□□□□ 0.86
CAPRIN1-217ENST00000534825 TPCN1Q9ULQ1 816 aa20.45■□□□□ 0.86
CAPRIN1-217ENST00000534825 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
CAPRIN1-217ENST00000534825 MEIS1O00470 390 aa20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 PITPNM1O00562 1244 aa20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 NOP56O00567 594 aaKnown RBP20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 EIF5BO60841 1220 aaKnown RBP20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 IQCF3P0C7M6 154 aa20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 ZNF200P98182 395 aaPredicted RBP20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 STK3Q13188 491 aa20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 CEP55Q53EZ4 464 aa20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 DHX38Q92620 1227 aaKnown RBP20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 C6orf50Q9HD87 102 aa20.44■□□□□ 0.86
CAPRIN1-217ENST00000534825 GSTTP1A0A1W2PQM5 241 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 FGBP02675 491 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 CYP3A4P08684 503 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 ARP10275 920 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 GNA11P29992 359 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 SMAD3P84022 425 aaKnown RBP20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 ARHGAP4P98171 946 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 SSRP1Q08945 709 aaKnown RBP20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 SCRN1Q12765 414 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 FAM109BQ6ICB4 259 aaPredicted RBP20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 Q7L0L9 218 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 RPUSD2Q8IZ73 545 aaKnown RBP20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 HERVK_113Q902F9 699 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 SH3GLB2Q9NR46 395 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 VPS54Q9P1Q0 977 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 NOD1Q9Y239 953 aa20.43■□□□□ 0.86
CAPRIN1-217ENST00000534825 EDIL3O43854 480 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 HOXC8P31273 242 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 SP4Q02446 784 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 BFSP2Q13515 415 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 GPNMBQ14956 572 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 PSRC1Q6PGN9 363 aaPredicted RBP20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 DEFB123Q8N688 67 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 RETREG2Q8NC44 543 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 SEPT1Q8WYJ6 367 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 RNPEPQ9H4A4 650 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 PKD2L1Q9P0L9 805 aa20.42■□□□□ 0.86
CAPRIN1-217ENST00000534825 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 FAM86B1E9PN63 330 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 CPLX1O14810 134 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 PFKFB2O60825 505 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 FAM86B2P0C5J1 330 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 AK2P54819 239 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 RBL2Q08999 1139 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 PTK7Q13308 1070 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 TRIM71Q2Q1W2 868 aaKnown RBP20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 UTP14CQ5TAP6 766 aaKnown RBP20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 MCTP2Q6DN12 878 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 NIPA1Q7RTP0 329 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 TRIM50Q86XT4 487 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 REXO1Q8N1G1 1221 aaKnown RBP20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 CAGE1Q8TC20 777 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 RASGRP4Q8TDF6 673 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 WNT8BQ93098 351 aa20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 AGO4Q9HCK5 861 aaKnown RBP20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 CXXC1Q9P0U4 656 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-217ENST00000534825 IGLV3-22A0A075B6J6 115 aa20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 DEXIO95424 95 aa20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 SMIM10L2AP0DMW4 78 aa20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 SMIM10L2BP0DMW5 78 aa20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 TCF7P36402 384 aaPredicted RBP20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 ITGB3BPQ13352 177 aaPredicted RBP20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 OTOP2Q7RTS6 562 aa20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 CCDC148Q8NFR7 591 aa20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 SLKQ9H2G2 1235 aaPredicted RBP20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 MTMR10Q9NXD2 777 aa20.4■□□□□ 0.86
CAPRIN1-217ENST00000534825 NFASCO94856 1347 aa20.39■□□□□ 0.85
CAPRIN1-217ENST00000534825 CKBP12277 381 aa20.39■□□□□ 0.85
CAPRIN1-217ENST00000534825 RFC2P35250 354 aa20.39■□□□□ 0.85
CAPRIN1-217ENST00000534825 ZNF76P36508 570 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms