RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 IRF2BP1Q8IU81 584 aa14.9□□□□□ -0.02
BEST1-208ENST00000534553 TC2NQ8N9U0 490 aa14.9□□□□□ -0.02
BEST1-208ENST00000534553 TBC1D5Q92609 795 aa14.9□□□□□ -0.02
BEST1-208ENST00000534553 DUSP9Q99956 384 aaKnown RBP14.9□□□□□ -0.02
BEST1-208ENST00000534553 EIF2AK1Q9BQI3 630 aaKnown RBP14.9□□□□□ -0.02
BEST1-208ENST00000534553 ZNF577Q9BSK1 485 aa14.9□□□□□ -0.02
BEST1-208ENST00000534553 TEKT3Q9BXF9 490 aa14.9□□□□□ -0.02
BEST1-208ENST00000534553 FHDC1Q9C0D6 1143 aaPredicted RBP14.9□□□□□ -0.02
BEST1-208ENST00000534553 KCND2Q9NZV8 630 aa14.9□□□□□ -0.02
BEST1-208ENST00000534553 PAXBP1Q9Y5B6 917 aa14.9□□□□□ -0.02
BEST1-208ENST00000534553 VWA5AO00534 786 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 ATP2A1O14983 1001 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 TEX33O43247 280 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 EYA4O95677 639 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 ALAS1P13196 640 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 TAL1P17542 331 aaPredicted RBP14.89□□□□□ -0.03
BEST1-208ENST00000534553 EPS15P42566 896 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 PTPN14Q15678 1187 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 TKFCQ3LXA3 575 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 ANKRD40Q6AI12 368 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 HSD17B14Q9BPX1 270 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 ZHX2Q9Y6X8 837 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 RBBP6Q7Z6E9 1792 aaKnown RBP14.89□□□□□ -0.03
BEST1-208ENST00000534553 POTEFA5A3E0 1075 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 EPHA7Q15375 998 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 POTEGQ6S5H5 508 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 POTEEQ6S8J3 1075 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 CPXCR1Q8N123 301 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 RETREG2Q8NC44 543 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
BEST1-208ENST00000534553 CYP2W1Q8TAV3 490 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 ZKSCAN4Q969J2 545 aaPredicted RBP14.89□□□□□ -0.03
BEST1-208ENST00000534553 DCPSQ96C86 337 aaKnown RBP14.89□□□□□ -0.03
BEST1-208ENST00000534553 CNOT6LQ96LI5 555 aaKnown RBP14.89□□□□□ -0.03
BEST1-208ENST00000534553 TUBGCP2Q9BSJ2 902 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 NUP58Q9BVL2 599 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 VPS16Q9H269 839 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 RAVER2Q9HCJ3 691 aaKnown RBP14.89□□□□□ -0.03
BEST1-208ENST00000534553 TAB2Q9NYJ8 693 aa14.89□□□□□ -0.03
BEST1-208ENST00000534553 IPO5O00410 1097 aaKnown RBP14.88□□□□□ -0.03
BEST1-208ENST00000534553 NFIBO00712 420 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 MFAP3LO75121 409 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 GNA14O95837 355 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 TNNT1P13805 278 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 DSG3P32926 999 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 HIRAP54198 1017 aaPredicted RBP14.88□□□□□ -0.03
BEST1-208ENST00000534553 UBXN1Q04323 297 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 COG2Q14746 738 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 SH3D19Q5HYK7 790 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 E4F1Q66K89 784 aaPredicted RBP14.88□□□□□ -0.03
BEST1-208ENST00000534553 NYAP1Q6ZVC0 841 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 SYTL5Q8TDW5 730 aaPredicted RBP14.88□□□□□ -0.03
BEST1-208ENST00000534553 ADAMTS5Q9UNA0 930 aa14.88□□□□□ -0.03
BEST1-208ENST00000534553 SSC5DA1L4H1 1573 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
BEST1-208ENST00000534553 GAP43P17677 238 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 FKBP3Q00688 224 aaKnown RBP14.87□□□□□ -0.03
BEST1-208ENST00000534553 HERC4Q5GLZ8 1057 aaPredicted RBP14.87□□□□□ -0.03
BEST1-208ENST00000534553 B3GNT9Q6UX72 402 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 TMEM139Q8IV31 216 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 MB21D1Q8N884 522 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 C16orf45Q96MC5 204 aaPredicted RBP14.87□□□□□ -0.03
BEST1-208ENST00000534553 CEP63Q96MT8 703 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 TRERF1Q96PN7 1200 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 NACC1Q96RE7 527 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 SEMA6BQ9H3T3 888 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 TBC1D22BQ9NU19 505 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 HOXC10Q9NYD6 342 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 UBIAD1Q9Y5Z9 338 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 SBF1O95248 1867 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 MAFGO15525 162 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 FECHP22830 423 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 MTIF2P46199 727 aaKnown RBP14.87□□□□□ -0.03
BEST1-208ENST00000534553 HMGCS2P54868 508 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 RPS6P62753 249 aaKnown RBP14.87□□□□□ -0.03
BEST1-208ENST00000534553 RBL2Q08999 1139 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 FKBP15Q5T1M5 1219 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 RNF207Q6ZRF8 634 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 ZNF507Q8TCN5 953 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 JADE2Q9NQC1 790 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 RNF181Q9P0P0 153 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 AFG3L2Q9Y4W6 797 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 PCDHA2Q9Y5H9 948 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 COL4A3BPQ9Y5P4 624 aa14.87□□□□□ -0.03
BEST1-208ENST00000534553 EML1O00423 815 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 TBCAO75347 108 aaKnown RBP14.86□□□□□ -0.03
BEST1-208ENST00000534553 SLITRK3O94933 977 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 GYPCP04921 128 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 PRKCSHP14314 528 aaPredicted RBP14.86□□□□□ -0.03
BEST1-208ENST00000534553 MAP3K9P80192 1104 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 PABPC4Q13310 644 aaKnown RBP eCLIP14.86□□□□□ -0.03
BEST1-208ENST00000534553 EDRF1Q3B7T1 1238 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 CEP135Q66GS9 1140 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 CATSPERGQ6ZRH7 1159 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 CREBRFQ8IUR6 639 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 ATG4CQ96DT6 458 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 PPP1R13BQ96KQ4 1090 aa14.86□□□□□ -0.03
BEST1-208ENST00000534553 NOC4LQ9BVI4 516 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms