RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 DPF3Q92784 378 aa15.96■□□□□ 0.15
VPS11-205ENST00000534551 EMID1Q96A84 441 aaPredicted RBP15.96■□□□□ 0.15
VPS11-205ENST00000534551 MLXIPQ9HAP2 919 aa15.96■□□□□ 0.15
VPS11-205ENST00000534551 ATP11BQ9Y2G3 1177 aa15.96■□□□□ 0.15
VPS11-205ENST00000534551 TANC1Q9C0D5 1861 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 CCDC194A0A1B0GVG4 234 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 K7ELQ4 463 aaPredicted RBP15.95■□□□□ 0.14
VPS11-205ENST00000534551 MEIS1O00470 390 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 SLC37A4O43826 429 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 PQBP1O60828 265 aaKnown RBP15.95■□□□□ 0.14
VPS11-205ENST00000534551 CUL4AQ13619 759 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 LAMC2Q13753 1193 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 KCNV1Q6PIU1 500 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 METTL7BQ6UX53 244 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 FAM177A1Q8N128 213 aaPredicted RBP15.95■□□□□ 0.14
VPS11-205ENST00000534551 PPTC7Q8NI37 304 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 VTI1AQ96AJ9 217 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 GLT1D1Q96MS3 346 aa15.95■□□□□ 0.14
VPS11-205ENST00000534551 CEP290O15078 2479 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 KAT6AQ92794 2004 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 TGFB3P10600 412 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 CAPN2P17655 700 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 CIITAP33076 1130 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 NEDD9Q14511 834 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 LETM2Q2VYF4 491 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 KAT2BQ92831 832 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 GPR20Q99678 358 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 HTATIP2Q9BUP3 242 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 ZMYND8Q9ULU4 1186 aaPredicted RBP15.94■□□□□ 0.14
VPS11-205ENST00000534551 SMC3Q9UQE7 1217 aa15.94■□□□□ 0.14
VPS11-205ENST00000534551 NOP56O00567 594 aaKnown RBP15.93■□□□□ 0.14
VPS11-205ENST00000534551 ZEB2O60315 1214 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 CCNE2O96020 404 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 HOXD8P13378 290 aaPredicted RBP15.93■□□□□ 0.14
VPS11-205ENST00000534551 SYN1P17600 705 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 SETQ01105 290 aaPredicted RBP15.93■□□□□ 0.14
VPS11-205ENST00000534551 UTP14CQ5TAP6 766 aaKnown RBP15.93■□□□□ 0.14
VPS11-205ENST00000534551 MCTP2Q6DN12 878 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 NIPA1Q7RTP0 329 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 NEK8Q86SG6 692 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 FBXO18Q8NFZ0 1043 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 CDHR1Q96JP9 859 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 MTG1Q9BT17 334 aaPredicted RBP15.93■□□□□ 0.14
VPS11-205ENST00000534551 BRMS1Q9HCU9 246 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 JPH1Q9HDC5 661 aaPredicted RBP15.93■□□□□ 0.14
VPS11-205ENST00000534551 POLR3EQ9NVU0 708 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 SCN5AQ14524 2016 aa15.93■□□□□ 0.14
VPS11-205ENST00000534551 A0A0U1RQG5 324 aaPredicted RBP15.92■□□□□ 0.14
VPS11-205ENST00000534551 MSH4O15457 936 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 EVI5O60447 810 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 F2P00734 622 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 LGALS2P05162 132 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 TLE2Q04725 743 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 ITGA7Q13683 1181 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 DGKDQ16760 1214 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 SH3RF1Q7Z6J0 888 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 HSCBQ8IWL3 235 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 SNX21Q969T3 373 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 SENP7Q9BQF6 1050 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 ZNF577Q9BSK1 485 aa15.92■□□□□ 0.14
VPS11-205ENST00000534551 SIP14410 1827 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 GSTTP1A0A1W2PQM5 241 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 ARVCFO00192 962 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 IPO5O00410 1097 aaKnown RBP15.91■□□□□ 0.14
VPS11-205ENST00000534551 DHX15O43143 795 aaKnown RBP15.91■□□□□ 0.14
VPS11-205ENST00000534551 TCF7P36402 384 aaPredicted RBP15.91■□□□□ 0.14
VPS11-205ENST00000534551 USP11P51784 963 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 NBR1Q14596 966 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 NBPF20Q3BBV1 942 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 BRDTQ58F21 947 aaPredicted RBP15.91■□□□□ 0.14
VPS11-205ENST00000534551 FAM47CQ5HY64 1035 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 FAM126BQ8IXS8 530 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 MBOAT7Q96N66 472 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 SDF4Q9BRK5 362 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 C16orf70Q9BSU1 422 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 PRDM5Q9NQX1 630 aaPredicted RBP15.91■□□□□ 0.14
VPS11-205ENST00000534551 PDLIM7Q9NR12 457 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 SLC9A2Q9UBY0 812 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 DDX25Q9UHL0 483 aaKnown RBP15.91■□□□□ 0.14
VPS11-205ENST00000534551 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.91■□□□□ 0.14
VPS11-205ENST00000534551 ARID2Q68CP9 1835 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 NFASCO94856 1347 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 ELP1O95163 1332 aa15.91■□□□□ 0.14
VPS11-205ENST00000534551 H0YGN5 161 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 CHMP2AO43633 222 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 B4GALT4O60513 344 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 CCNT1O60563 726 aaKnown RBP15.9■□□□□ 0.14
VPS11-205ENST00000534551 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 MARK3P27448 753 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 PSEN2P49810 448 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 ACTR2P61160 394 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 HIC1Q14526 733 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 MFSD10Q14728 455 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 SAFBQ15424 915 aaKnown RBP eCLIP15.9■□□□□ 0.14
VPS11-205ENST00000534551 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 PCYT2Q99447 389 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 TRPV6Q9H1D0 765 aa15.9■□□□□ 0.14
VPS11-205ENST00000534551 TRMT13Q9NUP7 481 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms