RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 COL8A1P27658 744 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 NOS3P29474 1203 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 SREBF2Q12772 1141 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 CCDC93Q567U6 631 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 C16orf86Q6ZW13 317 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 ZNF513Q8N8E2 541 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 RIN3Q8TB24 985 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 JDP2Q8WYK2 163 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 VWCEQ96DN2 955 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 FAM46AQ96IP4 442 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 ZNF512BQ96KM6 892 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 PSMG3-AS1Q96PY0 264 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 NFAT5O94916 1531 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 TEP1Q99973 2627 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 DNAH12Q6ZR08 3092 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 ZFYVE26Q68DK2 2539 aa6.18□□□□□ -1.42
ECHDC1-223ENST00000534442 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ADM5C9JUS6 153 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 DYNC1LI2O43237 492 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 EPHX1P07099 455 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 NFICP08651 508 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 SPATA31C1P0DKV0 1188 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 RAB6AP20340 208 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ZNF143P52747 638 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 GYS2P54840 703 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 KRT26Q7Z3Y9 468 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 SLC51AQ86UW1 340 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 BEND7Q8N7W2 519 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 MFSD2AQ8NA29 543 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ZBTB38Q8NAP3 1195 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 KCNH5Q8NCM2 988 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 FBLIM1Q8WUP2 373 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 WFDC12Q8WWY7 111 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 PIGBQ92521 554 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 HAUS7Q99871 368 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 KLHL25Q9H0H3 589 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 SEMA6CQ9H3T2 930 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ADAMTS8Q9UP79 889 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 CEP131Q9UPN4 1083 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ZNF646O15015 1829 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ITGB4P16144 1822 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ADGRB1O14514 1584 aa6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 FAM208AQ9UK61 1670 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-223ENST00000534442 ANKRD31Q8N7Z5 1873 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 SSC5DA1L4H1 1573 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 ANKRD34BA5PLL1 514 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 PI4K2BG5E9Z4 385 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 SHOXO15266 292 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 SLITRK5O94991 958 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 SERPINB2P05120 415 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 GLB1P16278 677 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 IREB2P48200 963 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 USP11P51784 963 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 NFIXQ14938 502 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 PTPROQ16827 1216 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 SGO2Q562F6 1265 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 FOXB2Q5VYV0 432 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 DCAF15Q66K64 600 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 SEZ6L2Q6UXD5 910 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 ANKRD13AQ8IZ07 590 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 ZSWIM2Q8NEG5 633 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 EZH1Q92800 747 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 SGSM3Q96HU1 749 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 CEP41Q9BYV8 373 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 LGR6Q9HBX8 967 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 IFT57Q9NWB7 429 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 APEX2Q9UBZ4 518 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 DAGLAQ9Y4D2 1042 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 ZNF451Q9Y4E5 1061 aa6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 ANKRD17O75179 2603 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-223ENST00000534442 PPP1R12AO14974 1030 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 SART1O43290 800 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 GAS2O43903 313 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 ASMTLO95671 621 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 CAPNS1P04632 268 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 GJB1P08034 283 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 KCNQ1P51787 676 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 LONRF2Q1L5Z9 754 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 SV2CQ496J9 727 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 TMEM67Q5HYA8 995 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 RNF187Q5TA31 235 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 HEATR6Q6AI08 1181 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 LETMD1Q6P1Q0 360 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 OLFM4Q6UX06 510 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 CDH24Q86UP0 819 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 CCDC144CPQ8IYA2 1237 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 LRRC47Q8N1G4 583 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 FGD4Q96M96 766 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 KREMEN1Q96MU8 473 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 FEZ1Q99689 392 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 APBA2Q99767 749 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 MIPEPQ99797 713 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 LGR4Q9BXB1 951 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 ARHGEF4Q9NR80 690 aa6.15□□□□□ -1.42
ECHDC1-223ENST00000534442 ARFGEF2Q9Y6D5 1785 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms