RNA–Protein interactions for RNA: ENST00000534317.1

PDE3B-205, Transcript of phosphodiesterase 3B, humanhuman

TSL 1 (best)

Gene PDE3B, Length 5,521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-205ENST00000534317 ABCD1P33897 745 aa20.24■□□□□ 0.83
PDE3B-205ENST00000534317 USP14P54578 494 aa20.24■□□□□ 0.83
PDE3B-205ENST00000534317 RASGRF1Q13972 1273 aa20.24■□□□□ 0.83
PDE3B-205ENST00000534317 SPDYE16A6NNV3 312 aaPredicted RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 CLGNO14967 610 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 GPC4O75487 556 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 ATP1A3P13637 1013 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 SPDYE2Q495Y8 402 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 SYDE2Q5VT97 1194 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 CYP4F22Q6NT55 531 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 RRP15Q9Y3B9 282 aaKnown RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 KRT1P04264 644 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 SERPINB2P05120 415 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 SERPINB6P35237 376 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 CLCN6P51797 869 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 SH3BGRP55822 239 aaPredicted RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 LUC7L3O95232 432 aaKnown RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 STAT2P52630 851 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 KRT31Q15323 416 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 MB21D1Q8N884 522 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 PRPF31Q8WWY3 499 aaKnown RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 HVCN1Q96D96 273 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 WDR70Q9NW82 654 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 TMEM94Q12767 1356 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 RPAP1Q9BWH6 1393 aaPredicted RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 ERBB3P21860 1342 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 MMEL1Q495T6 779 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 JADE1Q6IE81 842 aa20.23■□□□□ 0.83
PDE3B-205ENST00000534317 FAM193BQ96PV7 902 aaPredicted RBP20.23■□□□□ 0.83
PDE3B-205ENST00000534317 INO80B-WBP1J3KQ70 363 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 CYP27A1Q02318 531 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 SLMAPQ14BN4 828 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 DIXDC1Q155Q3 683 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 SULF1Q8IWU6 871 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 INO80BQ9C086 356 aaPredicted RBP20.22■□□□□ 0.83
PDE3B-205ENST00000534317 CNOT10Q9H9A5 744 aaKnown RBP20.22■□□□□ 0.83
PDE3B-205ENST00000534317 CTNND1O60716 968 aaKnown RBP20.22■□□□□ 0.83
PDE3B-205ENST00000534317 MXI1P50539 228 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 NNTQ13423 1086 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 RESP18Q5W5W9 173 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 WHAMMQ8TF30 809 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 DCPSQ96C86 337 aaKnown RBP20.22■□□□□ 0.83
PDE3B-205ENST00000534317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.22■□□□□ 0.834e-8■■■■□ 22.3
PDE3B-205ENST00000534317 GOLGA8SH3BPF8 625 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 MCF2LO15068 1137 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 MFAP3LO75121 409 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 MSH2P43246 934 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 ZKSCAN8Q15776 578 aaPredicted RBP20.22■□□□□ 0.83
PDE3B-205ENST00000534317 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
PDE3B-205ENST00000534317 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
PDE3B-205ENST00000534317 NT5C2P49902 561 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 MECOMQ03112 1051 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 TMED2Q15363 201 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 ALS2CLQ60I27 953 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 DNAJC24Q6P3W2 148 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 ARMC9Q7Z3E5 817 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 CDHR1Q96JP9 859 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 UBE2SQ16763 222 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 PPP4R3CPQ6ZMV5 832 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 CCHCR1Q8TD31 782 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 HDAC11Q96DB2 347 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 APOL6Q9BWW8 343 aa20.22■□□□□ 0.83
PDE3B-205ENST00000534317 GCKP35557 465 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 EFCAB13Q8IY85 973 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 RPS6KC1Q96S38 1066 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 ADCY1Q08828 1119 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 SARM1Q6SZW1 724 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 EXOC4Q96A65 974 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 TRIM56Q9BRZ2 755 aaKnown RBP20.21■□□□□ 0.83
PDE3B-205ENST00000534317 USP17L3A6NCW0 530 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 USP17L4A6NCW7 530 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 CPP00450 1065 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 USP17L1Q7RTZ2 530 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 GOLGA8QA0A0J9YX86 632 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 GOLGA8OA6NCC3 632 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 GOLGA8NF8WBI6 632 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 SRGAP2BP0DMP2 458 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 DMTNQ08495 405 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 RAPH1Q70E73 1250 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 SH3GLB2Q9NR46 395 aa20.21■□□□□ 0.83
PDE3B-205ENST00000534317 PNMA6FA0A0J9YX94 578 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 GOLGA8CPA6NN73 597 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 H7C1W4 665 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 FAM149B1Q96BN6 582 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 DDX27Q96GQ7 796 aaKnown RBP20.2■□□□□ 0.82
PDE3B-205ENST00000534317 STRBPQ96SI9 672 aaKnown RBP20.2■□□□□ 0.82
PDE3B-205ENST00000534317 AKT3Q9Y243 479 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 NUB1Q9Y5A7 615 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 ROBO2Q9HCK4 1378 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
PDE3B-205ENST00000534317 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 MED7O43513 233 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 RCN2Q14257 317 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 CASP8Q14790 479 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 FAM196AQ6ZSG2 479 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 EXOC8Q8IYI6 725 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 DBNDD1Q9H9R9 158 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 SMYD2Q9NRG4 433 aa20.2■□□□□ 0.82
PDE3B-205ENST00000534317 PI4KBQ9UBF8 816 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms