RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 RDH13Q8NBN7 331 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 APOL6Q9BWW8 343 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 KIAA1586Q9HCI6 787 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 PRELPP51888 382 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 MTMR2Q13614 643 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 HADHQ16836 314 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 CFAP58Q5T655 872 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 SESTD1Q86VW0 696 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GPR161Q8N6U8 529 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 VCPKMTQ9H867 229 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 PDE6CP51160 858 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 MFAP3P55082 362 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 PPP1R7Q15435 360 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 AKR1B1P15121 316 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 PPP4CP60510 307 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 UBE2SQ16763 222 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 KYAT1Q16773 422 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 Q3C1V9 767 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 ERO1BQ86YB8 467 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 TAB2Q9NYJ8 693 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 SAMD15Q9P1V8 674 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 GUCA1BQ9UMX6 200 aa12.31□□□□□ -0.44
AMBRA1-211ENST00000533727 HOXA13P31271 388 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 GBA2Q9HCG7 927 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 K7ERI5 159 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 DLATP10515 647 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 BIRC2Q13490 618 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 SEPT6Q14141 434 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 QRICH1Q2TAL8 776 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 ENAHQ8N8S7 591 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 RPF1Q9H9Y2 349 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 ST7Q9NRC1 585 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 ZNF500O60304 480 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 USP11P51784 963 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 PTK2Q05397 1052 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 TBC1D10CQ8IV04 446 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 PPFIBP2Q8ND30 876 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 RASGRP4Q8TDF6 673 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 PSPC1Q8WXF1 523 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 MYCBPQ99417 103 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 LBHD1Q9BQE6 289 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 ZNF302Q9NR11 478 aa12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 FEZ2Q9UHY8 353 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-211ENST00000533727 C3P01024 1663 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 FAM196BA6NMK8 535 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 MAGEA1P43355 309 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 MORC3Q14149 939 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 PDIA6Q15084 440 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 ARMCX2Q7L311 632 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 LDHDQ86WU2 507 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 ZBTB9Q96C00 473 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 SLC12A6Q9UHW9 1150 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 MXRA7P84157 204 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 C16orf86Q6ZW13 317 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 STAMQ92783 540 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 HAUS1Q96CS2 278 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 LSM14BQ9BX40 385 aaKnown RBP12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 OATP04181 439 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 ANXA13P27216 316 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 ARHGAP44Q17R89 818 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 ZNF365Q70YC5 407 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 SMIM5Q71RC9 77 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 C17orf53Q8N3J3 647 aaPredicted RBP12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 CCDC127Q96BQ5 260 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 CAPZA3Q96KX2 299 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 FAM49AQ9H0Q0 323 aaPredicted RBP12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 PCDHA7Q9UN72 937 aa12.29□□□□□ -0.44
AMBRA1-211ENST00000533727 MED7O43513 233 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 ARHGAP4P98171 946 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 ZBTB16Q05516 673 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 SGMS1Q86VZ5 419 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 GPC2Q8N158 579 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 SAMD3Q8N6K7 520 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 SLC44A5Q8NCS7 719 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 SELENOSQ9BQE4 189 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 GCOM2Q9BZD3 368 aaPredicted RBP12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 KCNJ18B7U540 433 aa12.28□□□□□ -0.44
AMBRA1-211ENST00000533727 POLRMTO00411 1230 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms