RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 DSEQ9UL01 958 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 PCDHA9Q9Y5H5 950 aa4.05□□□□□ -1.76
ATM-220ENST00000533526 SLC27A2O14975 620 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 NKRFO15226 690 aaKnown RBP eCLIP4.04□□□□□ -1.76
ATM-220ENST00000533526 SMARCA5O60264 1052 aaPredicted RBP4.04□□□□□ -1.76
ATM-220ENST00000533526 RFPL3O75679 317 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 CYP7B1O75881 506 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 SRGAP2CP0DJJ0 459 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 ZSCAN22P10073 491 aaPredicted RBP4.04□□□□□ -1.76
ATM-220ENST00000533526 COL6A2P12110 1019 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 MC3RP41968 323 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 LIMS1P48059 325 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 EPHA5P54756 1037 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 HTRA3P83110 453 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 SQSTM1Q13501 440 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 GPR19Q15760 415 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 TTLL7Q6ZT98 887 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 LINC00482Q8N8I6 264 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 LINC01356Q8N9X3 169 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 KYQ8NBH2 561 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 FNIP1Q8TF40 1166 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 RNPC3Q96LT9 517 aaKnown RBP4.04□□□□□ -1.76
ATM-220ENST00000533526 PLA2G2DQ9UNK4 145 aa4.04□□□□□ -1.76
ATM-220ENST00000533526 LRG1P02750 347 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 C8BP07358 591 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 PYGMP11217 842 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 FLT3P36888 993 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 LACTBP83111 547 aaPredicted RBP4.03□□□□□ -1.76
ATM-220ENST00000533526 TUSC3Q13454 348 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 CR1LQ2VPA4 569 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 TEPPQ6URK8 271 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 ARHGAP36Q6ZRI8 547 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 KCTD1Q719H9 257 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.03□□□□□ -1.76
ATM-220ENST00000533526 SAPCD2Q86UD0 394 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 CLEC4DQ8WXI8 215 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 ZBTB8AQ96BR9 441 aa4.03□□□□□ -1.76
ATM-220ENST00000533526 C11orf84Q9BUA3 381 aaPredicted RBP4.03□□□□□ -1.76
ATM-220ENST00000533526 CELF4Q9BZC1 486 aaKnown RBP4.03□□□□□ -1.76
ATM-220ENST00000533526 TCRBV16S1A1N1A0A5B0 115 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 ESYT3A0FGR9 886 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 CCDC66A2RUB6 948 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 SH3D21A4FU49 640 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 RAPGEF3O95398 923 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 ASMTLO95671 621 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 ASLP04424 464 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 ENO2P09104 434 aaPredicted RBP4.02□□□□□ -1.77
ATM-220ENST00000533526 PDE6AP16499 860 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 FAHP16930 419 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 GJA4P35212 333 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 DNM2P50570 870 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 PAN2Q504Q3 1202 aaKnown RBP4.02□□□□□ -1.77
ATM-220ENST00000533526 C16orf86Q6ZW13 317 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 BRAPQ7Z569 592 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 DDX53Q86TM3 631 aaKnown RBP4.02□□□□□ -1.77
ATM-220ENST00000533526 OSTM1Q86WC4 334 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 FAM26EQ8N5C1 309 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 SCLYQ96I15 445 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 WRNIP1Q96S55 665 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 TMEM209Q96SK2 561 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 GORASP1Q9BQQ3 440 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 TRIM39Q9HCM9 518 aa4.02□□□□□ -1.77
ATM-220ENST00000533526 TLDC2A0PJX2 215 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 FFAR3O14843 346 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 CLASP2O75122 1294 aaKnown RBP4.01□□□□□ -1.77
ATM-220ENST00000533526 RASGRP1O95267 797 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 PLA2G1BP04054 148 aaKnown RBP4.01□□□□□ -1.77
ATM-220ENST00000533526 CKMP06732 381 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 IGFALSP35858 605 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 STAT5AP42229 794 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 ITGA1P56199 1179 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 ARHGAP44Q17R89 818 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 BTBD8Q5XKL5 378 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 LCNL1Q6ZST4 164 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 UBE2R2Q712K3 238 aaPredicted RBP4.01□□□□□ -1.77
ATM-220ENST00000533526 SP8Q8IXZ3 490 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 CLUHP3Q96NS8 147 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 CLIC6Q96NY7 704 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 NOX5Q96PH1 765 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 KANSL2Q9H9L4 492 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 LUC7LQ9NQ29 371 aaKnown RBP4.01□□□□□ -1.77
ATM-220ENST00000533526 INTS7Q9NVH2 962 aaKnown RBP4.01□□□□□ -1.77
ATM-220ENST00000533526 FANCLQ9NW38 375 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 NTMQ9P121 344 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 MAGEC2Q9UBF1 373 aaPredicted RBP4.01□□□□□ -1.77
ATM-220ENST00000533526 CBLCQ9ULV8 474 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 SRPK3Q9UPE1 567 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 ATP23Q9Y6H3 246 aa4.01□□□□□ -1.77
ATM-220ENST00000533526 TCRBV5S4A2TA0A5A2 114 aa4□□□□□ -1.77
ATM-220ENST00000533526 ZNF561-AS1K7EIQ3 104 aa4□□□□□ -1.77
ATM-220ENST00000533526 PPP1R12AO14974 1030 aaPredicted RBP4□□□□□ -1.77
ATM-220ENST00000533526 OPA1O60313 960 aa4□□□□□ -1.77
ATM-220ENST00000533526 CDC45O75419 566 aa4□□□□□ -1.77
ATM-220ENST00000533526 SASH1O94885 1247 aa4□□□□□ -1.77
ATM-220ENST00000533526 AMY2AP04746 511 aa4□□□□□ -1.77
ATM-220ENST00000533526 KCNA6P17658 529 aa4□□□□□ -1.77
ATM-220ENST00000533526 KRT15P19012 456 aa4□□□□□ -1.77
ATM-220ENST00000533526 AMY2BP19961 511 aa4□□□□□ -1.77
ATM-220ENST00000533526 RPL13P26373 211 aaKnown RBP4□□□□□ -1.77
ATM-220ENST00000533526 KCNC1P48547 511 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms