RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 KCNQ2O43526 872 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 PPP4R3AQ6IN85 833 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 PPP1R18Q6NYC8 613 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 C15orf52Q6ZUT6 534 aaKnown RBP18.31■□□□□ 0.52
CTSB-228ENST00000533455 TRIM59Q8IWR1 403 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 MICALL1Q8N3F8 863 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 WHAMMQ8TF30 809 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 PIK3R5Q8WYR1 880 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 EPB41L5Q9HCM4 733 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 ZNF233A6NK53 670 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 BTNL10A8MVZ5 291 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 ERLIN2O94905 339 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 MYBP10242 640 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 KLRC1P26715 233 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 BTDP43251 543 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 FAM26FQ5R3K3 315 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 HYIQ5T013 277 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 TPTE2Q6XPS3 522 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 SPATS2Q86XZ4 545 aaKnown RBP18.3■□□□□ 0.52
CTSB-228ENST00000533455 ZC3H3Q8IXZ2 948 aaKnown RBP18.3■□□□□ 0.52
CTSB-228ENST00000533455 EIF1ADQ8N9N8 165 aaKnown RBP18.3■□□□□ 0.52
CTSB-228ENST00000533455 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.3■□□□□ 0.522e-8■□□□□ 11
CTSB-228ENST00000533455 PAGR1Q9BTK6 254 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 TRAF5O00463 557 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 FAM153BP0C7A2 387 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 PDHBP11177 359 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 GUCY2DQ02846 1103 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 PDCLQ13371 301 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 CDC37Q16543 378 aaPredicted RBP18.3■□□□□ 0.52
CTSB-228ENST00000533455 SKIDA1Q1XH10 827 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 FAM153CQ494X1 144 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 ASPRV1Q53RT3 343 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 MMS22LQ6ZRQ5 1243 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 B4GALNT4Q76KP1 1039 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 ZNF804AQ7Z570 1209 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 CASKIN2Q8WXE0 1202 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 AIPL1Q9NZN9 384 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 FAM153AQ9UHL3 310 aa18.3■□□□□ 0.52
CTSB-228ENST00000533455 FTCDO95954 541 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 POLR2FP61218 127 aaKnown RBP18.29■□□□□ 0.52
CTSB-228ENST00000533455 ECM1Q16610 540 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 TBC1D5Q92609 795 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 PANK4Q9NVE7 773 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 TMEM59LQ9UK28 342 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
CTSB-228ENST00000533455 ZSCAN5CA6NGD5 496 aaPredicted RBP18.28■□□□□ 0.52
CTSB-228ENST00000533455 SRRM3A6NNA2 597 aaPredicted RBP18.28■□□□□ 0.52
CTSB-228ENST00000533455 KRT14P02533 472 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 PLCG2P16885 1265 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 HSPA9P38646 679 aaKnown RBP18.28■□□□□ 0.52
CTSB-228ENST00000533455 TNNC1P63316 161 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 SH2D3CQ8N5H7 860 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 COA7Q96BR5 231 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 KRT12Q99456 494 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 GANQ9H2C0 597 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 SRP68Q9UHB9 627 aaKnown RBP18.28■□□□□ 0.52
CTSB-228ENST00000533455 PCDHA2Q9Y5H9 948 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 NDUFAB1O14561 156 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 SLC26A4O43511 780 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 SNHG28P0DPA3 235 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 ERCC3P19447 782 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 CLK2P49760 499 aaKnown RBP18.28■□□□□ 0.52
CTSB-228ENST00000533455 LIG3P49916 1009 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 RC3H1Q5TC82 1133 aaKnown RBP18.28■□□□□ 0.52
CTSB-228ENST00000533455 TTC19Q6DKK2 380 aaPredicted RBP18.28■□□□□ 0.52
CTSB-228ENST00000533455 BARGINQ6ZT62 677 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 USP38Q8NB14 1042 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 ANKIB1Q9P2G1 1089 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
CTSB-228ENST00000533455 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
CTSB-228ENST00000533455 A0A087X0T9 212 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 ESYT3A0FGR9 886 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 RPS6KA4O75676 772 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 FAM228BP0C875 321 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 ASIC2Q16515 512 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 C10orf76Q5T2E6 689 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 IFT81Q8WYA0 676 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 KAT2BQ92831 832 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 HAS1Q92839 578 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.52
CTSB-228ENST00000533455 NT5C3AQ9H0P0 336 aa18.27■□□□□ 0.52
CTSB-228ENST00000533455 FRMPD2Q68DX3 1309 aaPredicted RBP18.27■□□□□ 0.51
CTSB-228ENST00000533455 HMGB1P1B2RPK0 211 aaPredicted RBP18.27■□□□□ 0.51
CTSB-228ENST00000533455 INPP5BP32019 993 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 GTF2A1P52655 376 aaPredicted RBP18.27■□□□□ 0.51
CTSB-228ENST00000533455 KLHL30Q0D2K2 578 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 GRAPQ13588 217 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 RAPGEF1Q13905 1077 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 KIAA0753Q2KHM9 967 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 CCDC65Q8IXS2 484 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 CCDC24Q8N4L8 307 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.51
CTSB-228ENST00000533455 ATP6V1G3Q96LB4 118 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 EPN3Q9H201 632 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 KCTD10Q9H3F6 313 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms