RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 GPRASP2Q96D09 838 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 CDK5RAP3Q96JB5 506 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 CDHR1Q96JP9 859 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 MAGEF1Q9HAY2 307 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 AGO4Q9HCK5 861 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 TBC1D22BQ9NU19 505 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 VAV3Q9UKW4 847 aa13.79□□□□□ -0.2
TGFBR3-211ENST00000533370 A0A0G2JMZ2 1700 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 MYH7BA7E2Y1 1941 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 SOWAHBA6NEL2 793 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 POTEMA6NI47 508 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 IGF2BP3O00425 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 GAS7O60861 476 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 SMC2O95347 1197 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 CAVIN2O95810 425 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 TYRO3Q06418 890 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 POSTNQ15063 836 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 HYIQ5T013 277 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 PDXDC2PQ6P474 469 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 TEKT3Q9BXF9 490 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 NT5C3AQ9H0P0 336 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 STK17AQ9UEE5 414 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 TUBE1Q9UJT0 475 aa13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-211ENST00000533370 DHX15O43143 795 aaKnown RBP13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 MYL1P05976 194 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 PLCG1P19174 1290 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 EDNRBP24530 442 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 YY1P25490 414 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 MAPK4P31152 587 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 ALDH5A1P51649 535 aaPredicted RBP13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 AMPD3Q01432 767 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 GRB10Q13322 594 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 PNOCQ13519 176 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 GNPTABQ3T906 1256 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 NT5DC1Q5TFE4 455 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 WDR78Q5VTH9 848 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 PNMA5Q96PV4 448 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 UIMC1Q96RL1 719 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 PORCNQ9H237 461 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 R3HDMLQ9H3Y0 253 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 EFCC1Q9HA90 598 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 KBTBD4Q9NVX7 518 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 ANO10Q9NW15 660 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.21
TGFBR3-211ENST00000533370 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 FOXN1O15353 648 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 PPP1R37O75864 691 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 MUTP22033 750 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 RPA1P27694 616 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 AFMP43652 599 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 PDE4DQ08499 809 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 EPHA7Q15375 998 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 TAF1CQ15572 869 aaPredicted RBP13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 TMEM119Q4V9L6 283 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 ZNF784Q8NCA9 323 aaPredicted RBP13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 SPATA20Q8TB22 786 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 SMARCE1Q969G3 411 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 PLIN2Q99541 437 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 HSD17B14Q9BPX1 270 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 ZFYVE28Q9HCC9 887 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 IVNS1ABPQ9Y6Y0 642 aa13.76□□□□□ -0.21
TGFBR3-211ENST00000533370 ADGRA2Q96PE1 1338 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 ASB14A6NK59 587 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 RGS20O76081 388 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 PGK2P07205 417 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 ICAM3P32942 547 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 MRE11P49959 708 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 NLRP12P59046 1061 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 DPYDQ12882 1025 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 SEMA3FQ13275 785 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 STX1AQ16623 288 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 C17orf99Q6UX52 265 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 PLEKHH3Q7Z736 793 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 CATSPER3Q86XQ3 398 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 MORC4Q8TE76 937 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 ERCC4Q92889 916 aaPredicted RBP13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 GSDMAQ96QA5 445 aa13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
TGFBR3-211ENST00000533370 TUFT1Q9NNX1 390 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms