RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 GPR20Q99678 358 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 C22orf23Q9BZE7 217 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 SLKQ9H2G2 1235 aaPredicted RBP11.25□□□□□ -0.61
NUP98-220ENST00000533346 NCOA5Q9HCD5 579 aaKnown RBP11.25□□□□□ -0.61
NUP98-220ENST00000533346 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
NUP98-220ENST00000533346 TANC1Q9C0D5 1861 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 TRIP12Q14669 1992 aaPredicted RBP11.25□□□□□ -0.61
NUP98-220ENST00000533346 KAT6AQ92794 2004 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 CPLX1O14810 134 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 ATG7O95352 703 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 USP11P51784 963 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 MTMR1Q13613 665 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
NUP98-220ENST00000533346 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 CTAGE1Q96RT6 745 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
NUP98-220ENST00000533346 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
NUP98-220ENST00000533346 KCNH7Q9NS40 1196 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 WDR81Q562E7 1941 aa11.24□□□□□ -0.61
NUP98-220ENST00000533346 IGLV3-22A0A075B6J6 115 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 H3BRB1 525 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 EDIL3O43854 480 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
NUP98-220ENST00000533346 CTDNEP1O95476 244 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 PSEN2P49810 448 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 NEK4P51957 841 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 ARHGAP4P98171 946 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 FPGSQ05932 587 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.61
NUP98-220ENST00000533346 MFSD10Q14728 455 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 NPY5RQ15761 445 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 ME3Q16798 604 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 RASIP1Q5U651 963 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 CYFIP1Q7L576 1253 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 CAGE1Q8TC20 777 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 SEPT1Q8WYJ6 367 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 GTF3C6Q969F1 213 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
NUP98-220ENST00000533346 TRPV6Q9H1D0 765 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 TUT1Q9H6E5 874 aaKnown RBP11.23□□□□□ -0.61
NUP98-220ENST00000533346 BCAS3Q9H6U6 928 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 PCDHA4Q9UN74 947 aa11.23□□□□□ -0.61
NUP98-220ENST00000533346 CYP3A7-CYP3A51PA0A087WV96 503 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 IGKV6D-21A0A0A0MT36 114 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 GSTTP1A0A1W2PQM5 241 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 ADAMTS3O15072 1205 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 LGR5O75473 907 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 LGALS2P05162 132 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 PFKMP08237 780 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 CYP3A7P24462 503 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 RFC2P35250 354 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 ADAM17P78536 824 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 SETQ01105 290 aaPredicted RBP11.22□□□□□ -0.61
NUP98-220ENST00000533346 KIAA0753Q2KHM9 967 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 MOXD1Q6UVY6 613 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 C16orf59Q7L2K0 433 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 EMSYQ7Z589 1322 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 WASF1Q92558 559 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 PHF20Q9BVI0 1012 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 HIPK3Q9H422 1215 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 AGO4Q9HCK5 861 aaKnown RBP11.22□□□□□ -0.61
NUP98-220ENST00000533346 IL23AQ9NPF7 189 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 TRMT13Q9NUP7 481 aaKnown RBP11.22□□□□□ -0.61
NUP98-220ENST00000533346 TMEM260Q9NX78 707 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
NUP98-220ENST00000533346 FAM86B1E9PN63 330 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 NOP56O00567 594 aaKnown RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 DHX15O43143 795 aaKnown RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 FAM86B2P0C5J1 330 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 ARP10275 920 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 XBP1P17861 261 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 EPHB4P54760 987 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 NLRP5P59047 1200 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 STK3Q13188 491 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 PTK7Q13308 1070 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 BFSP2Q13515 415 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 SHHQ15465 462 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 PTGISQ16647 500 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 JAKMIP3Q5VZ66 844 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 GDF6Q6KF10 455 aaPredicted RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 RPAINQ86UA6 219 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 C7orf31Q8N865 590 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 CYP2W1Q8TAV3 490 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 VWCEQ96DN2 955 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 ZSCAN31Q96LW9 406 aaPredicted RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 MBOAT7Q96N66 472 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
NUP98-220ENST00000533346 WNT8AQ9H1J5 351 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
NUP98-220ENST00000533346 LIMCH1Q9UPQ0 1083 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms