RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 SPATA33Q96N06 139 aa10.81□□□□□ -0.68
CTSB-227ENST00000533110 IWS1Q96ST2 819 aa10.81□□□□□ -0.68
CTSB-227ENST00000533110 RMDN3Q96TC7 470 aa10.81□□□□□ -0.68
CTSB-227ENST00000533110 IL17RBQ9NRM6 502 aa10.81□□□□□ -0.68
CTSB-227ENST00000533110 DDX41Q9UJV9 622 aaKnown RBP10.81□□□□□ -0.68
CTSB-227ENST00000533110 PLAGL2Q9UPG8 496 aa10.81□□□□□ -0.68
CTSB-227ENST00000533110 MYO15AQ9UKN7 3530 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 RIF1Q5UIP0 2472 aaKnown RBP10.8□□□□□ -0.68
CTSB-227ENST00000533110 MYO7AQ13402 2215 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 FAM186AA6NE01 2351 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 MED19A0JLT2 244 aaPredicted RBP10.8□□□□□ -0.68
CTSB-227ENST00000533110 FSD2A1L4K1 749 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 SRGAP2BP0DMP2 458 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 MTMR3Q13615 1198 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 HIC1Q14526 733 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 P2RX5Q93086 422 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 GPATCH3Q96I76 525 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTSB-227ENST00000533110 CCDC171Q6TFL3 1326 aa10.8□□□□□ -0.68
CTSB-227ENST00000533110 TREHO43280 583 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 SORBS3O60504 671 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 EIF3JO75822 258 aaKnown RBP10.79□□□□□ -0.68
CTSB-227ENST00000533110 SMIM10L2AP0DMW4 78 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 SMIM10L2BP0DMW5 78 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 TOP1P11387 765 aaKnown RBP10.79□□□□□ -0.68
CTSB-227ENST00000533110 GNAT1P11488 350 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
CTSB-227ENST00000533110 EIF2AK2P19525 551 aaKnown RBP10.79□□□□□ -0.68
CTSB-227ENST00000533110 CAMK1Q14012 370 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 NAALADL2Q58DX5 795 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 MCF2L2Q86YR7 1114 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 UBALD2Q8IYN6 164 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 TMEM105Q8N8V8 129 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 SYTL5Q8TDW5 730 aaPredicted RBP10.79□□□□□ -0.68
CTSB-227ENST00000533110 MICAL1Q8TDZ2 1067 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 TAAR1Q96RJ0 339 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 MAF1Q9H063 256 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 MFSD1Q9H3U5 465 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 TLE6Q9H808 572 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 TOMM22Q9NS69 142 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
CTSB-227ENST00000533110 H3BRB1 525 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 KRT37O76014 449 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 RGS20O76081 388 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 GGPS1O95749 300 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 GLP2RO95838 553 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 ITGB1P05556 798 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 GHRP10912 638 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 PDHBP11177 359 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 SP100P23497 879 aaPredicted RBP10.78□□□□□ -0.68
CTSB-227ENST00000533110 CTDSPL2Q05D32 466 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 HSDL1Q3SXM5 330 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 KREMEN2Q8NCW0 462 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 POF1BQ8WVV4 589 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 SUSD6Q92537 303 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 TMEM47Q9BQJ4 181 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 LRRCC1Q9C099 1032 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 TUT1Q9H6E5 874 aaKnown RBP10.78□□□□□ -0.68
CTSB-227ENST00000533110 RC3H2Q9HBD1 1191 aaKnown RBP10.78□□□□□ -0.68
CTSB-227ENST00000533110 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
CTSB-227ENST00000533110 ABCB11O95342 1321 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 DCHS1Q96JQ0 3298 aa10.78□□□□□ -0.68
CTSB-227ENST00000533110 GVINP1Q7Z2Y8 2422 aa10.77□□□□□ -0.68
CTSB-227ENST00000533110 CACNA1BQ00975 2339 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 NOP56O00567 594 aaKnown RBP10.77□□□□□ -0.69
CTSB-227ENST00000533110 DGKIO75912 1065 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 NR3C2P08235 984 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 DNAJB1P25685 340 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 NOVP48745 357 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 ZNF543Q08ER8 600 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 CELF3Q5SZQ8 465 aaKnown RBP10.77□□□□□ -0.69
CTSB-227ENST00000533110 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
CTSB-227ENST00000533110 CMTR2Q8IYT2 770 aaKnown RBP10.77□□□□□ -0.69
CTSB-227ENST00000533110 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 SPPL3Q8TCT6 385 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 KCNG4Q8TDN1 519 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 ZNF689Q96CS4 500 aaPredicted RBP10.77□□□□□ -0.69
CTSB-227ENST00000533110 RMDN1Q96DB5 314 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 C16orf70Q9BSU1 422 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 OSBPL7Q9BZF2 842 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 MLXIPQ9HAP2 919 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 COL20A1Q9P218 1284 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 NR2E1Q9Y466 385 aa10.77□□□□□ -0.69
CTSB-227ENST00000533110 LGALS2P05162 132 aa10.76□□□□□ -0.69
CTSB-227ENST00000533110 HOXC8P31273 242 aa10.76□□□□□ -0.69
CTSB-227ENST00000533110 ARHGAP4P98171 946 aa10.76□□□□□ -0.69
CTSB-227ENST00000533110 CDC37Q16543 378 aaPredicted RBP10.76□□□□□ -0.69
CTSB-227ENST00000533110 RRP12Q5JTH9 1297 aaKnown RBP10.76□□□□□ -0.69
CTSB-227ENST00000533110 GPATCH4Q5T3I0 446 aaKnown RBP10.76□□□□□ -0.69
CTSB-227ENST00000533110 PANK1Q8TE04 598 aa10.76□□□□□ -0.69
CTSB-227ENST00000533110 CDCA3Q99618 268 aaPredicted RBP10.76□□□□□ -0.69
CTSB-227ENST00000533110 RNPEPQ9H4A4 650 aa10.76□□□□□ -0.69
CTSB-227ENST00000533110 PXMP2Q9NR77 195 aa10.76□□□□□ -0.69
CTSB-227ENST00000533110 ZNF215Q9UL58 517 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms