RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 TXNDC9O14530 226 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 HEXIM1O94992 359 aaKnown RBP9.5□□□□□ -0.89
CTNND1-232ENST00000532649 GSTA1P08263 222 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 GSTA2P09210 222 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 MARK3P27448 753 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 LRRC41Q15345 812 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 NXNQ6DKJ4 435 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SPDYE1Q8NFV5 336 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-232ENST00000532649 OR8K1Q8NGG5 319 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 PPP1R16BQ96T49 567 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 HESX1Q9UBX0 185 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 PCDHB6Q9Y5E3 794 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 ZBTB5O15062 677 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 EVCP57679 992 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SPP2Q13103 211 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SDCCAG3Q96C92 435 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SCYL1Q96KG9 808 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 GSDMAQ96QA5 445 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 TRIM31Q9BZY9 425 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 NUB1Q9Y5A7 615 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SMIM24O75264 130 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 NR2F2P24468 414 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 MYL7Q01449 175 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SCARF1Q14162 830 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 RPS6KA1Q15418 735 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 BSPRYQ5W0U4 402 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 ATG9AQ7Z3C6 839 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 MAIP1Q8WWC4 291 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 OTUD5Q96G74 571 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 ACCSQ96QU6 501 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 STK17AQ9UEE5 414 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 UBN2Q6ZU65 1347 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 KCNA4P22459 653 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 TSNAXIP1Q2TAA8 658 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SNRNP48Q6IEG0 339 aaKnown RBP9.5□□□□□ -0.89
CTNND1-232ENST00000532649 EXOC8Q8IYI6 725 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 RYBPQ8N488 228 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-232ENST00000532649 LINC00301Q8NCQ3 95 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 CNOT6LQ96LI5 555 aaKnown RBP9.5□□□□□ -0.89
CTNND1-232ENST00000532649 ASIC3Q9UHC3 531 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 XPOTO43592 962 aaKnown RBP9.49□□□□□ -0.89
CTNND1-232ENST00000532649 CAPN2P17655 700 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 CUL4AQ13619 759 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 PRPSAP1Q14558 356 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 RABL6Q3YEC7 729 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-232ENST00000532649 CROCCP2Q86T23 111 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 GPT2Q8TD30 523 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 UBE2Q2Q8WVN8 375 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 CCDC51Q96ER9 411 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 ZNRF3Q9ULT6 936 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 ANGPTL3Q9Y5C1 460 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 COG7P83436 770 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 SF3B3Q15393 1217 aaKnown RBP9.49□□□□□ -0.89
CTNND1-232ENST00000532649 MAP3K21Q5TCX8 1036 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 SCYL2Q6P3W7 929 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 GRAMD1CQ8IYS0 662 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 ENAHQ8N8S7 591 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-232ENST00000532649 RSAD2Q8WXG1 361 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 RILPQ96NA2 401 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 SH3GLB2Q9NR46 395 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 ITSN1Q15811 1721 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 IQCA1LA6NCM1 817 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 POLR2BP30876 1174 aaKnown RBP9.49□□□□□ -0.89
CTNND1-232ENST00000532649 EXOC3L4Q17RC7 722 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 SMYD4Q8IYR2 804 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-232ENST00000532649 STAM2O75886 525 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 CTTNQ14247 550 aaKnown RBP9.49□□□□□ -0.89
CTNND1-232ENST00000532649 RCSD1Q6JBY9 416 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 KLHL7Q8IXQ5 586 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 ANKRD36BP1Q96IX9 119 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 PCDHA6Q9UN73 950 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 PCDHA8Q9Y5H6 950 aa9.49□□□□□ -0.89
CTNND1-232ENST00000532649 GSG1L2A8MUP6 293 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 AP3B2Q13367 1082 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 RMDN3Q96TC7 470 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 PCIF1Q9H4Z3 704 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 FBXO40Q9UH90 709 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 NRXN1Q9ULB1 1477 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 CLIC2O15247 247 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TUBBP07437 444 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 ZSCAN20P17040 1043 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 PLCG1P19174 1290 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TSPYL2Q9H2G4 693 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 PLCB1Q9NQ66 1216 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 PSMC2P35998 433 aaKnown RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 KRT33BQ14525 404 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 EZH2Q15910 746 aaKnown RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 C17orf53Q8N3J3 647 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-232ENST00000532649 HAUS1Q96CS2 278 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 RFX7Q2KHR2 1363 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 CNTNAP4Q9C0A0 1308 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 PLA2G4BP0C869 781 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 IRX4P78413 519 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 TUBB2AQ13885 445 aa9.48□□□□□ -0.89
CTNND1-232ENST00000532649 CCDC105Q8IYK2 499 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms