RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 TNNQ9UQP3 1299 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 GAPVD1Q14C86 1478 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 STRNO43815 780 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 MOCS3O95396 460 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 TFAP4Q01664 338 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 PUDPQ08623 228 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 TTC6Q86TZ1 520 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 RASSF3Q86WH2 238 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 FAM178BQ8IXR5 827 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 MICALL2Q8IY33 904 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 INPP5DQ92835 1189 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 RNPEPQ9H4A4 650 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 TBC1D7Q9P0N9 293 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 DMPKQ09013 629 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 MAPRE2Q15555 327 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 HABP4Q5JVS0 413 aaKnown RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 C11orf88Q6PI97 169 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 MAEAQ7L5Y9 396 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 CABP7Q86V35 215 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 UNC45BQ8IWX7 931 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 EXOC8Q8IYI6 725 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 UBE2OQ9C0C9 1292 aaKnown RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 KLHL25Q9H0H3 589 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 METTL14Q9HCE5 456 aaKnown RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 BIN2Q9UBW5 565 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 EPN1Q9Y6I3 576 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 PRDM2Q13029 1718 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 DTNBO60941 627 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 SRGAP2CP0DJJ0 459 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 PLS3P13797 630 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 DDX5P17844 614 aaKnown RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 PTPREP23469 700 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 NFKBIAP25963 317 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 PMLP29590 882 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 SLCO1A2P46721 670 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 PAPOLAP51003 745 aaKnown RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 ADCK5Q3MIX3 580 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 ARHGAP17Q68EM7 881 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 RYBPQ8N488 228 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 TMEM87BQ96K49 555 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 ZFP42Q96MM3 310 aa8.73□□□□□ -1.01
CTNND1-231ENST00000532463 ARMCX3Q9UH62 379 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-231ENST00000532463 H0YCG3 227 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 RALBP11234 206 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 KLC1Q07866 573 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 NR1H3Q13133 447 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 CNGA3Q16281 694 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 OTULINQ96BN8 352 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 KDM3AQ9Y4C1 1321 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 COPEO14579 308 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 FAM107AO95990 144 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 SNAP25P60880 206 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 RASSF7Q02833 373 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 KRT33BQ14525 404 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 IMPG1Q17R60 797 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 CHST3Q7LGC8 479 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 C16orf62Q7Z3J2 963 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 MYOCDQ8IZQ8 938 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 THEMISQ8N1K5 641 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 DEPTORQ8TB45 409 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 RPAP3Q9H6T3 665 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 EXOSC4Q9NPD3 245 aaKnown RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 MORC2Q9Y6X9 1032 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 RTEL1-TNFRSF6BF6WH68 1400 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 VCPP55072 806 aaKnown RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 IGBP1P78318 339 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 INPP5AQ14642 412 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 MIGA1Q8NAN2 632 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 LRRC59Q96AG4 307 aaKnown RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 ZMYND12Q9H0C1 365 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 PIGUQ9H490 435 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 ATP5J2-PTCD1G3V325 749 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 TBC1D4O60343 1298 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 SEC24DO94855 1032 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 AARS2Q5JTZ9 985 aaKnown RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 CENPUQ71F23 418 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 OTUD6AQ7L8S5 288 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 BBS7Q8IWZ6 715 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 DIS3L2Q8IYB7 885 aaKnown RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
CTNND1-231ENST00000532463 MICU2Q8IYU8 434 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 CCNYQ8ND76 341 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 TESK2Q96S53 571 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 SMARCAD1Q9H4L7 1026 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 CCDC134Q9H6E4 229 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 ABCF3Q9NUQ8 709 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 USE1Q9NZ43 259 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 CASKIN1Q8WXD9 1431 aa8.72□□□□□ -1.01
CTNND1-231ENST00000532463 F8W031 263 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-231ENST00000532463 SNPHO15079 494 aa8.71□□□□□ -1.01
CTNND1-231ENST00000532463 TSC22D2O75157 780 aa8.71□□□□□ -1.01
CTNND1-231ENST00000532463 PTPROQ16827 1216 aa8.71□□□□□ -1.01
CTNND1-231ENST00000532463 LRRC49Q8IUZ0 686 aa8.71□□□□□ -1.01
CTNND1-231ENST00000532463 PDIK1LQ8N165 341 aa8.71□□□□□ -1.01
CTNND1-231ENST00000532463 MCRS1Q96EZ8 462 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms