RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 REXO2Q9Y3B8 237 aaKnown RBP11.81□□□□□ -0.52
CHEK1-213ENST00000532449 RTCBQ9Y3I0 505 aaKnown RBP11.81□□□□□ -0.52
CHEK1-213ENST00000532449 MAP2K7O14733 419 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 PPP1R37O75864 691 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 HOXA13P31271 388 aaPredicted RBP11.81□□□□□ -0.52
CHEK1-213ENST00000532449 IFI16Q16666 785 aaKnown RBP11.81□□□□□ -0.52
CHEK1-213ENST00000532449 EXOC3L4Q17RC7 722 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 KRT25Q7Z3Z0 450 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 MSANTD4Q8NCY6 345 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 NCAPGQ9BPX3 1015 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 YIPF3Q9GZM5 350 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 PLEKHG1Q9ULL1 1385 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 DLG5Q8TDM6 1919 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 USP17L5A8MUK1 530 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 PDHA1P08559 390 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 FGFR4P22455 802 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 ISCA1Q9BUE6 129 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 TRIM9Q9C026 710 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 AMFRQ9UKV5 643 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 ADAMTS13Q76LX8 1427 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 POC1B-GALNT4F8VUJ3 575 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 NKRFO15226 690 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHEK1-213ENST00000532449 GTF2IP78347 998 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 MXRA7P84157 204 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 KAZNQ674X7 775 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 HS2ST1Q7LGA3 356 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 GLG1Q92896 1179 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 PHF20Q9BVI0 1012 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
CHEK1-213ENST00000532449 ATG3Q9NT62 314 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 ARHGAP20Q9P2F6 1191 aa11.81□□□□□ -0.52
CHEK1-213ENST00000532449 DDX25Q9UHL0 483 aaKnown RBP11.81□□□□□ -0.52
CHEK1-213ENST00000532449 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 FLOT1O75955 427 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 NUGGCQ68CJ6 796 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 INTS8Q75QN2 995 aaKnown RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 KLC4Q9NSK0 619 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 TPX2Q9ULW0 747 aaKnown RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 UTYO14607 1347 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 CCDC160A6NGH7 325 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 EPB41P11171 864 aaKnown RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 SLC9A1P19634 815 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 CASP7P55210 303 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 MFSD14BQ5SR56 506 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 GLYCTKQ8IVS8 523 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 DHTKD1Q96HY7 919 aaPredicted RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 MTRF1LQ9UGC7 380 aaKnown RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 A0A087X0T9 212 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 MMEP08473 750 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 FAM228BP0C875 321 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 TRIM49P0CI25 452 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 TRIM49CP0CI26 452 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 RFC4P35249 363 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 STAT1P42224 750 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 KCNJ1P48048 391 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 KLHL29Q96CT2 875 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 BICD1Q96G01 975 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
CHEK1-213ENST00000532449 DBR1Q9UK59 544 aaKnown RBP11.8□□□□□ -0.52
CHEK1-213ENST00000532449 C3P01024 1663 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 MYMKA6NI61 221 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 OPLAHO14841 1288 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 SART1O43290 800 aaKnown RBP11.79□□□□□ -0.52
CHEK1-213ENST00000532449 KRT15P19012 456 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 STX2P32856 288 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 BTDP43251 543 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 TNIP1Q15025 636 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 PKN1Q16512 942 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 CDKAL1Q5VV42 579 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 PPM1KQ8N3J5 372 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 AZI2Q9H6S1 392 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHEK1-213ENST00000532449 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 LDHCP07864 332 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 ITGA4P13612 1032 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 FKBP3Q00688 224 aaKnown RBP11.79□□□□□ -0.52
CHEK1-213ENST00000532449 PFKFB3Q16875 520 aaPredicted RBP11.79□□□□□ -0.52
CHEK1-213ENST00000532449 EMBQ6PCB8 327 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 CPXCR1Q8N123 301 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 HVCN1Q96D96 273 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 GCNT4Q9P109 453 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 GOLGA8IPA6NC78 632 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 GOLGA8JA6NMD2 632 aa11.79□□□□□ -0.52
CHEK1-213ENST00000532449 PGRMC1O00264 195 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms