RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 USP40Q9NVE5 1235 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 PRPF6O94906 941 aaKnown RBP12.44□□□□□ -0.42
NXF1-211ENST00000531709 NR1D1P20393 614 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 RPL13P26373 211 aaKnown RBP12.44□□□□□ -0.42
NXF1-211ENST00000531709 STAT3P40763 770 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 TTBK2Q6IQ55 1244 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 CCDC26Q8TAB7 109 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 GOLGA6L10A0A0M3HER8 536 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 PVALEFA0A1B0GWK0 134 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 ACTN1P12814 892 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 KLRC1P26715 233 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 ALS2CLQ60I27 953 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 HAUS3Q68CZ6 603 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 SCLT1Q96NL6 688 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 BACH1O14867 736 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 SSR1P43307 286 aaKnown RBP12.43□□□□□ -0.42
NXF1-211ENST00000531709 MYCT1Q8N699 235 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 ZNF384Q8TF68 577 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 ZIM3Q96PE6 472 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 UTP11Q9Y3A2 253 aaKnown RBP12.43□□□□□ -0.42
NXF1-211ENST00000531709 KIF13AQ9H1H9 1805 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 HGSO14964 777 aaPredicted RBP12.43□□□□□ -0.42
NXF1-211ENST00000531709 GNA14O95837 355 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 KCNH2Q12809 1159 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 ALKBH5Q6P6C2 394 aaKnown RBP12.43□□□□□ -0.42
NXF1-211ENST00000531709 CREG2Q8IUH2 290 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 LINC00116Q8NCU8 138 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 GIMAP7Q8NHV1 300 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 CTNNBL1Q8WYA6 563 aaPredicted RBP12.43□□□□□ -0.42
NXF1-211ENST00000531709 MTMR8Q96EF0 704 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 DDX47Q9H0S4 455 aaKnown RBP12.43□□□□□ -0.42
NXF1-211ENST00000531709 PLAAQ9Y263 795 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 H2AFZP0C0S5 128 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 GRB10Q13322 594 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 FBXW10Q5XX13 1052 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 H2AFVQ71UI9 128 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 HS2ST1Q7LGA3 356 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 TPH2Q8IWU9 490 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 HDAC9Q9UKV0 1011 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
NXF1-211ENST00000531709 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 CYP2J2P51589 502 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 CEP72Q9P209 647 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 ZBTB21Q9ULJ3 1066 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 LEMD3Q9Y2U8 911 aa12.43□□□□□ -0.42
NXF1-211ENST00000531709 PALM3A6NDB9 673 aaPredicted RBP12.42□□□□□ -0.42
NXF1-211ENST00000531709 USP17L10C9JJH3 530 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 GFPT2O94808 682 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 GRIK5Q16478 980 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 MEA1Q16626 185 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
NXF1-211ENST00000531709 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
NXF1-211ENST00000531709 OR2W6PQ8NHA6 318 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 NEDD1Q8NHV4 660 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 SPZ1Q9BXG8 430 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 TULP2O00295 520 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 TNFAIP3P21580 790 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 SEC24CP53992 1094 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 POTEGQ6S5H5 508 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 PACSIN1Q9BY11 444 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 CD209Q9NNX6 404 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 CALUO43852 315 aaPredicted RBP12.42□□□□□ -0.42
NXF1-211ENST00000531709 STAT1P42224 750 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 IRX3P78415 501 aaPredicted RBP12.42□□□□□ -0.42
NXF1-211ENST00000531709 CENPPQ6IPU0 288 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 MMGT1Q8N4V1 131 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 ATP8A1Q9Y2Q0 1164 aa12.42□□□□□ -0.42
NXF1-211ENST00000531709 KDM3AQ9Y4C1 1321 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 A0A087X0T9 212 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 ZNF263O14978 683 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 TTLL1O95922 423 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 GLI1P08151 1106 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 FAM228BP0C875 321 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 AKR1B1P15121 316 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 CORO7P57737 925 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 PSMD2Q13200 908 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 ASPRV1Q53RT3 343 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 MIIPQ5JXC2 388 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 ICE2Q659A1 982 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 A6NNZ2 444 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 NKRFO15226 690 aaKnown RBP eCLIP12.41□□□□□ -0.42
NXF1-211ENST00000531709 CACNB3P54284 484 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 TUBB8Q3ZCM7 444 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 ZNF622Q969S3 477 aaKnown RBP eCLIP12.41□□□□□ -0.426e-8■■□□□ 11.4
NXF1-211ENST00000531709 UBXN6Q9BZV1 441 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 AMFRQ9UKV5 643 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 CTDP1Q9Y5B0 961 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms