RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 KLF10Q13118 480 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 ACBD5Q5T8D3 534 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-220ENST00000531466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.72□□□□□ -1.17
PTPRK-220ENST00000531466 SEC16BQ96JE7 1060 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 KRTAP9-8Q9BYQ0 159 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 PCED1AQ9H1Q7 454 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 SLITRK6Q9H5Y7 841 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 MYOTQ9UBF9 498 aa7.72□□□□□ -1.17
PTPRK-220ENST00000531466 DGKIO75912 1065 aa7.71□□□□□ -1.18
PTPRK-220ENST00000531466 HDLBPQ00341 1268 aaKnown RBP7.71□□□□□ -1.18
PTPRK-220ENST00000531466 CRB2Q5IJ48 1285 aa7.71□□□□□ -1.18
PTPRK-220ENST00000531466 DENND5AQ6IQ26 1287 aa7.71□□□□□ -1.18
PTPRK-220ENST00000531466 C6orf15Q6UXA7 325 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-220ENST00000531466 NUDT10Q8NFP7 164 aa7.71□□□□□ -1.18
PTPRK-220ENST00000531466 NUDT11Q96G61 164 aa7.71□□□□□ -1.18
PTPRK-220ENST00000531466 ING1Q9UK53 422 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-220ENST00000531466 B2RBV5 119 aa7.7□□□□□ -1.18
PTPRK-220ENST00000531466 COL6A1P12109 1028 aa7.7□□□□□ -1.18
PTPRK-220ENST00000531466 TESK1Q15569 626 aa7.7□□□□□ -1.18
PTPRK-220ENST00000531466 TMCO4Q5TGY1 634 aa7.7□□□□□ -1.18
PTPRK-220ENST00000531466 Q8TCH9 128 aa7.7□□□□□ -1.18
PTPRK-220ENST00000531466 EPB41L1Q9H4G0 881 aa7.7□□□□□ -1.18
PTPRK-220ENST00000531466 CPP00450 1065 aa7.69□□□□□ -1.18
PTPRK-220ENST00000531466 TMEM145Q8NBT3 493 aa7.69□□□□□ -1.18
PTPRK-220ENST00000531466 ADAM29Q9UKF5 820 aa7.69□□□□□ -1.18
PTPRK-220ENST00000531466 STRIP2Q9ULQ0 834 aa7.69□□□□□ -1.18
PTPRK-220ENST00000531466 VAMP1P23763 118 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 GFRA1P56159 465 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 LARP1BQ659C4 914 aaKnown RBP7.68□□□□□ -1.18
PTPRK-220ENST00000531466 PROSER1Q86XN7 944 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 FAM178BQ8IXR5 827 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 CCDC140Q96MF4 163 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 GNRHR2Q96P88 292 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 ZNF341Q9BYN7 854 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 SMOC1Q9H4F8 434 aa7.68□□□□□ -1.18
PTPRK-220ENST00000531466 SMAD7O15105 426 aaKnown RBP7.67□□□□□ -1.18
PTPRK-220ENST00000531466 SUSD5O60279 629 aa7.67□□□□□ -1.18
PTPRK-220ENST00000531466 CNOT4O95628 575 aaKnown RBP7.67□□□□□ -1.18
PTPRK-220ENST00000531466 GRIN1Q05586 938 aa7.67□□□□□ -1.18
PTPRK-220ENST00000531466 RALYLQ86SE5 291 aaKnown RBP7.67□□□□□ -1.18
PTPRK-220ENST00000531466 PHOSPHO1Q8TCT1 267 aa7.67□□□□□ -1.18
PTPRK-220ENST00000531466 ASH2LQ9UBL3 628 aa7.67□□□□□ -1.18
PTPRK-220ENST00000531466 KLHL18O94889 574 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 VASNQ6EMK4 673 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 C1orf159Q96HA4 380 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 JAM3Q9BX67 310 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 ACBD3Q9H3P7 528 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 SEMA4AQ9H3S1 761 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 TESMINQ9Y4I5 508 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 MRVI1Q9Y6F6 885 aa7.66□□□□□ -1.18
PTPRK-220ENST00000531466 SLC27A2O14975 620 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 Q6ZUG5 572 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 GPR155Q7Z3F1 870 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 RBM12BQ8IXT5 1001 aaKnown RBP7.65□□□□□ -1.18
PTPRK-220ENST00000531466 DTX3Q8N9I9 347 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 PIP4K2CQ8TBX8 421 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 LRRC37BQ96QE4 947 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 CDIP1Q9H305 208 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 ACTR10Q9NZ32 417 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 HSPBP1Q9NZL4 362 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 INPP5FQ9Y2H2 1132 aa7.65□□□□□ -1.18
PTPRK-220ENST00000531466 KRIT1O00522 736 aa7.64□□□□□ -1.19
PTPRK-220ENST00000531466 FOXS1O43638 330 aa7.64□□□□□ -1.19
PTPRK-220ENST00000531466 MAFKO60675 156 aa7.64□□□□□ -1.19
PTPRK-220ENST00000531466 GLRBP48167 497 aa7.64□□□□□ -1.19
PTPRK-220ENST00000531466 TCTN3Q6NUS6 607 aa7.64□□□□□ -1.19
PTPRK-220ENST00000531466 DLL4Q9NR61 685 aa7.64□□□□□ -1.19
PTPRK-220ENST00000531466 PPARGC1AQ9UBK2 798 aaKnown RBP7.64□□□□□ -1.19
PTPRK-220ENST00000531466 NPIPB8E9PQR5 432 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 SMAD2Q15796 467 aaKnown RBP7.63□□□□□ -1.19
PTPRK-220ENST00000531466 HS1BP3Q53T59 392 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 SLC35F1Q5T1Q4 408 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 MRM1Q6IN84 353 aaKnown RBP7.63□□□□□ -1.19
PTPRK-220ENST00000531466 TRIM48Q8IWZ4 208 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 TTLL11Q8NHH1 800 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 CLEC4DQ8WXI8 215 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 LMF1Q96S06 567 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 SEC61A2Q9H9S3 476 aa7.63□□□□□ -1.19
PTPRK-220ENST00000531466 DDAH1O94760 285 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 FBXO21O94952 628 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 KNG1P01042 644 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 CKMP06732 381 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 GRIA2P42262 883 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 CYP4F22Q6NT55 531 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 GIMAP8Q8ND71 665 aaPredicted RBP7.62□□□□□ -1.19
PTPRK-220ENST00000531466 MICAL1Q8TDZ2 1067 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 SLC6A20Q9NP91 592 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 ZFP69BQ9UJL9 534 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 NPFFR2Q9Y5X5 522 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 SLC4A7Q9Y6M7 1214 aa7.62□□□□□ -1.19
PTPRK-220ENST00000531466 MSCO60682 206 aa7.61□□□□□ -1.19
PTPRK-220ENST00000531466 CSF2RBP32927 897 aa7.61□□□□□ -1.19
PTPRK-220ENST00000531466 MFAP1P55081 439 aaKnown RBP7.61□□□□□ -1.19
PTPRK-220ENST00000531466 PRKD1Q15139 912 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-220ENST00000531466 SKIDA1Q1XH10 827 aa7.61□□□□□ -1.19
PTPRK-220ENST00000531466 STPG3Q8N7X2 389 aa7.61□□□□□ -1.19
PTPRK-220ENST00000531466 ADOQ96SZ5 270 aa7.61□□□□□ -1.19
PTPRK-220ENST00000531466 LTFP02788 710 aa7.6□□□□□ -1.19
PTPRK-220ENST00000531466 ATF4P18848 351 aaPredicted RBP7.6□□□□□ -1.19
PTPRK-220ENST00000531466 TUSC3Q13454 348 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms