RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CYP39A1Q9NYL5 469 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 PDP2Q9P2J9 529 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.99
CSDE1-214ENST00000530886 ANKRD36CQ5JPF3 1778 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SNX3O60493 162 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 CTNND1O60716 968 aaKnown RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 TMCC1O94876 653 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 TPBGLP0DKB5 382 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 EIF2S2P20042 333 aaKnown RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 MAGEA10P43363 369 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 PHEXP78562 749 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SPA17Q15506 151 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 CCDC152Q4G0S7 254 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SYCP3Q8IZU3 236 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 PGM2Q96G03 612 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 ABCF3Q9NUQ8 709 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 PCDHA13Q9Y5I0 950 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SIGLEC16A6NMB1 481 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 MATR3P43243 847 aaKnown RBP eCLIP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 TNNC1P63316 161 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SULT2A1Q06520 285 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 FAM133BQ5BKY9 247 aaKnown RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 RNF220Q5VTB9 566 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 KLHDC7AQ5VTJ3 777 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 FAM114A1Q8IWE2 563 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 RBBP8NLQ8NC74 664 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 ZNF526Q8TF50 670 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 NOC3LQ8WTT2 800 aaKnown RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 TMEM237Q96Q45 408 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 YIPF2Q9BWQ6 316 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 ZCWPW1Q9H0M4 648 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 FOXP1Q9H334 677 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 PREBQ9HCU5 417 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 C9orf78Q9NZ63 289 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 LRWD1Q9UFC0 647 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SCOCQ9UIL1 159 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 LRCH1Q9Y2L9 728 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 CCDC88AQ3V6T2 1871 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 PEX11AO75192 247 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 ZNF24P17028 368 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 EIF4BP23588 611 aaKnown RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 PCK1P35558 622 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SLC4A8Q2Y0W8 1093 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 ODF2Q5BJF6 829 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SH2D4BQ5SQS7 431 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 SFMBT2Q5VUG0 894 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 KLHL10Q6JEL2 608 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 INPP4AQ96PE3 977 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-214ENST00000530886 TXLNGYQ9BZA5 131 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 RXFP1Q9HBX9 757 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 FAM114A2Q9NRY5 505 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 TBC1D30Q9Y2I9 924 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 TACC3Q9Y6A5 838 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 COMMD3-BMI1R4GMX3 469 aa8.89□□□□□ -0.99
CSDE1-214ENST00000530886 ZSCAN5CA6NGD5 496 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 A8MUI8 341 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 E2F6O75461 281 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 RFC5P40937 340 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PDE6CP51160 858 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 POLE2P56282 527 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 LSAMPQ13449 338 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 SAFBQ15424 915 aaKnown RBP eCLIP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 KIAA0825Q8IV33 1275 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 LRRC34Q8IZ02 419 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ADAM7Q9H2U9 754 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 USP15Q9Y4E8 981 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ECE2O60344 883 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 MMEP08473 750 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PARP1P09874 1014 aaKnown RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 NUDT17P0C025 328 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 WASHC2DQ5SRD0 308 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ZNF658Q5TYW1 1059 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 DNAJC9Q8WXX5 260 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PPP2R3CQ969Q6 453 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PYM1Q9BRP8 204 aaKnown RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 IFIH1Q9BYX4 1025 aaKnown RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 GPR108Q9NPR9 543 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PAG1Q9NWQ8 432 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ITGB1BP2Q9UKP3 347 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ESYT3A0FGR9 886 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ATP5HO75947 161 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 MOCS3O95396 460 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 LMNAP02545 664 aaKnown RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 GSTT1P30711 240 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ERVK-9P63128 1117 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 MRPS25P82663 173 aaKnown RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 TRIM29Q14134 588 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 GSTA3Q16772 222 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 TRIM68Q6AZZ1 485 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 CYB5R4Q7L1T6 521 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 CROCCP2Q86T23 111 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 HOOK3Q86VS8 718 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PHC3Q8NDX5 983 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 TBC1D16Q8TBP0 767 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 IGDCC4Q8TDY8 1250 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 ZNF333Q96JL9 665 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 OCEL1Q9H607 264 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 DLGAP2Q9P1A6 1054 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms