RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 ARMC5Q96C12 935 aa4.72□□□□□ -1.65
NUP98-218ENST00000530516 NBPF4Q96M43 638 aa4.72□□□□□ -1.65
NUP98-218ENST00000530516 AARSD1Q9BTE6 412 aaKnown RBP4.72□□□□□ -1.65
NUP98-218ENST00000530516 ZNF652Q9Y2D9 606 aa4.72□□□□□ -1.65
NUP98-218ENST00000530516 X6R8D5 127 aa4.72□□□□□ -1.65
NUP98-218ENST00000530516 FAM221BA6H8Z2 402 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 CCDC85CA6NKD9 419 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 PDPK1O15530 556 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 PRODHO43272 600 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 FSHBP01225 129 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 PABPC1P11940 636 aaKnown RBP4.71□□□□□ -1.66
NUP98-218ENST00000530516 C6P13671 934 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 ZNF28P17035 718 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 RASGRF1Q13972 1273 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 HSP90AA2PQ14568 343 aaPredicted RBP4.71□□□□□ -1.66
NUP98-218ENST00000530516 RASA3Q14644 834 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 PRAMEF18Q5VWM3 479 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 MCTP2Q6DN12 878 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 CEP68Q76N32 757 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 MILR1Q7Z6M3 343 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 KCTD13Q8WZ19 329 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 ZNF669Q96BR6 464 aaPredicted RBP4.71□□□□□ -1.66
NUP98-218ENST00000530516 CLIC6Q96NY7 704 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 SPATA9Q9BWV2 254 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 CCDC113Q9H0I3 377 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 COA3Q9Y2R0 106 aaPredicted RBP4.71□□□□□ -1.66
NUP98-218ENST00000530516 PCDHA2Q9Y5H9 948 aa4.71□□□□□ -1.66
NUP98-218ENST00000530516 BLACEA4D250 179 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 IQCA1LA6NCM1 817 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 DDX3XO00571 662 aaKnown RBP eCLIP4.7□□□□□ -1.66
NUP98-218ENST00000530516 FZD7O75084 574 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 CYP1A1P04798 512 aaPredicted RBP4.7□□□□□ -1.66
NUP98-218ENST00000530516 HMGA2P52926 109 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 FOXB2Q5VYV0 432 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 CIR1Q86X95 450 aaPredicted RBP4.7□□□□□ -1.66
NUP98-218ENST00000530516 TMEM209Q96SK2 561 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 TMEM168Q9H0V1 697 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 L2HGDHQ9H9P8 463 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 SIRPGQ9P1W8 387 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 PPARGC1AQ9UBK2 798 aaKnown RBP4.7□□□□□ -1.66
NUP98-218ENST00000530516 PFDN2Q9UHV9 154 aa4.7□□□□□ -1.66
NUP98-218ENST00000530516 TRAV20A0A0B4J274 112 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 NPEPPSL1A6NEC2 478 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 U2SURPO15042 1029 aaKnown RBP4.69□□□□□ -1.66
NUP98-218ENST00000530516 MAFKO60675 156 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 EPHB4P54760 987 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 LSAMPQ13449 338 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 PKN3Q6P5Z2 889 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 CRIP3Q6Q6R5 217 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 KCNT2Q6UVM3 1135 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 NSMFQ6X4W1 530 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 ARHGEF18Q6ZSZ5 1173 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 USP53Q70EK8 1073 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 LRRC47Q8N1G4 583 aaKnown RBP4.69□□□□□ -1.66
NUP98-218ENST00000530516 SH3RF3Q8TEJ3 882 aaPredicted RBP4.69□□□□□ -1.66
NUP98-218ENST00000530516 TRMT2BQ96GJ1 504 aaKnown RBP4.69□□□□□ -1.66
NUP98-218ENST00000530516 TMEM169Q96HH4 297 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 YTHDC1Q96MU7 727 aaKnown RBP4.69□□□□□ -1.66
NUP98-218ENST00000530516 SYT3Q9BQG1 590 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 PHF20Q9BVI0 1012 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 HIRIP3Q9BW71 556 aaPredicted RBP4.69□□□□□ -1.66
NUP98-218ENST00000530516 KLC2Q9H0B6 622 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 GPR27Q9NS67 375 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 SNTG2Q9NY99 539 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 PPP1R1BQ9UD71 204 aaPredicted RBP4.69□□□□□ -1.66
NUP98-218ENST00000530516 ASXL2Q76L83 1435 aa4.69□□□□□ -1.66
NUP98-218ENST00000530516 H7BY64 318 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 HGSO14964 777 aaPredicted RBP4.68□□□□□ -1.66
NUP98-218ENST00000530516 B4GALT3O60512 393 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 PPP2CBP62714 309 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 PPP2CAP67775 309 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 ADAM9Q13443 819 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 CR1LQ2VPA4 569 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 MTERF2Q49AM1 385 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 SLFN13Q68D06 897 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 KLHL36Q8N4N3 616 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 FAM26EQ8N5C1 309 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 DNERQ8NFT8 737 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 PHOSPHO1Q8TCT1 267 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 TOE1Q96GM8 510 aaKnown RBP4.68□□□□□ -1.66
NUP98-218ENST00000530516 DEPDC7Q96QD5 511 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 CLDND1Q9NY35 253 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 DTLQ9NZJ0 730 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 PPP4R1LQ9P1A2 415 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 FTSJ1Q9UET6 329 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 ST6GALNAC2Q9UJ37 374 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 TCAF1Q9Y4C2 921 aa4.68□□□□□ -1.66
NUP98-218ENST00000530516 C6orf222P0C671 652 aaPredicted RBP4.67□□□□□ -1.66
NUP98-218ENST00000530516 FAM153BP0C7A2 387 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 ACVRL1P37023 503 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 SELENOPP49908 381 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 SSRP1Q08945 709 aaKnown RBP4.67□□□□□ -1.66
NUP98-218ENST00000530516 EMC4Q5J8M3 183 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 FAM209AQ5JX71 171 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 STYK1Q6J9G0 422 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 CYP4F22Q6NT55 531 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 RSPO2Q6UXX9 243 aaPredicted RBP4.67□□□□□ -1.66
NUP98-218ENST00000530516 LIMS2Q7Z4I7 341 aa4.67□□□□□ -1.66
NUP98-218ENST00000530516 ZBTB38Q8NAP3 1195 aaPredicted RBP4.67□□□□□ -1.66
NUP98-218ENST00000530516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms