RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 SGSM2O43147 1006 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 CPEP16870 476 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 ITGB5P18084 799 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 MAPKAPK2P49137 400 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 ANAPC15P60006 121 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 SEPT7Q16181 437 aaKnown RBP8.31□□□□□ -1.08
VPS26B-205ENST00000530402 ARHGAP44Q17R89 818 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 EMC4Q5J8M3 183 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 ZNF605Q86T29 641 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 RBM12BQ8IXT5 1001 aaKnown RBP8.31□□□□□ -1.08
VPS26B-205ENST00000530402 NLGN4XQ8N0W4 816 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 NXPE1Q8N323 547 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 UHMK1Q8TAS1 419 aaKnown RBP8.31□□□□□ -1.08
VPS26B-205ENST00000530402 PHOSPHO1Q8TCT1 267 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 USP7Q93009 1102 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 GPATCH3Q96I76 525 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 CD244Q9BZW8 370 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 KLHL14Q9P2G3 628 aa8.31□□□□□ -1.08
VPS26B-205ENST00000530402 TCRBV5S4A2TA0A5A2 114 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 TRAF5O00463 557 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 TADA3O75528 432 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 AMY2AP04746 511 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 AMY2BP19961 511 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 IL2P60568 153 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 IGBP1P78318 339 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 SLC9A5Q14940 896 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 SKOR2Q2VWA4 1001 aaPredicted RBP8.3□□□□□ -1.08
VPS26B-205ENST00000530402 PLEKHN1Q494U1 663 aaPredicted RBP8.3□□□□□ -1.08
VPS26B-205ENST00000530402 HABP4Q5JVS0 413 aaKnown RBP8.3□□□□□ -1.08
VPS26B-205ENST00000530402 CYP4F22Q6NT55 531 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 KIF18BQ86Y91 864 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 TRIM48Q8IWZ4 208 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 ATL2Q8NHH9 583 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 DIRC2Q96SL1 478 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 YIPF4Q9BSR8 244 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 SMURF1Q9HCE7 757 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 B4GALT6Q9UBX8 382 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 SRPK3Q9UPE1 567 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 NOP58Q9Y2X3 529 aaKnown RBP8.3□□□□□ -1.08
VPS26B-205ENST00000530402 HCFC2Q9Y5Z7 792 aa8.3□□□□□ -1.08
VPS26B-205ENST00000530402 ZNF891A8MT65 544 aaPredicted RBP8.29□□□□□ -1.08
VPS26B-205ENST00000530402 HIP1RO75146 1068 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 F2P00734 622 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 TMEM132EQ6IEE7 984 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 KCTD1Q719H9 257 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 TMC6Q7Z403 805 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 ORAI3Q9BRQ5 295 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 BOCQ9BWV1 1114 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 MCM8Q9UJA3 840 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 ATP23Q9Y6H3 246 aa8.29□□□□□ -1.08
VPS26B-205ENST00000530402 ZNF503-AS2A6NEH8 195 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 MAN2B1O00754 1011 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 PPM1GO15355 546 aaPredicted RBP8.28□□□□□ -1.08
VPS26B-205ENST00000530402 MECP2P51608 486 aaKnown RBP8.28□□□□□ -1.08
VPS26B-205ENST00000530402 IRF9Q00978 393 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 AMPD3Q01432 767 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 TUSC3Q13454 348 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 DHCR24Q15392 516 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.28□□□□□ -1.08
VPS26B-205ENST00000530402 STRA8Q7Z7C7 330 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 SH3RF2Q8TEC5 729 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 ALG3Q92685 438 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 TTC1Q99614 292 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 NSUN3Q9H649 340 aaKnown RBP8.28□□□□□ -1.08
VPS26B-205ENST00000530402 BCAS3Q9H6U6 928 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 ZNF552Q9H707 407 aaPredicted RBP8.28□□□□□ -1.08
VPS26B-205ENST00000530402 DCP1AQ9NPI6 582 aaPredicted RBP8.28□□□□□ -1.08
VPS26B-205ENST00000530402 THG1LQ9NWX6 298 aaKnown RBP8.28□□□□□ -1.08
VPS26B-205ENST00000530402 FAM53CQ9NYF3 392 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 ASH2LQ9UBL3 628 aa8.28□□□□□ -1.08
VPS26B-205ENST00000530402 EIF4G1Q04637 1599 aaKnown RBP8.27□□□□□ -1.09
VPS26B-205ENST00000530402 TCRBV5S2A0A599 114 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 H7C1D1 291 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 SCDO00767 359 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 LTFP02788 710 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 TAL1P17542 331 aaPredicted RBP8.27□□□□□ -1.09
VPS26B-205ENST00000530402 YBX1P67809 324 aaKnown RBP8.27□□□□□ -1.09
VPS26B-205ENST00000530402 SRSF3P84103 164 aaKnown RBP8.27□□□□□ -1.09
VPS26B-205ENST00000530402 GRIN1Q05586 938 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 FIGNQ5HY92 759 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 HHIPL2Q6UWX4 724 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 ANKRD13AQ8IZ07 590 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 AFAP1L2Q8N4X5 818 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 ARRDC4Q8NCT1 418 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 TSPAN17Q96FV3 270 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 GPR101Q96P66 508 aaPredicted RBP8.27□□□□□ -1.09
VPS26B-205ENST00000530402 BRINP2Q9C0B6 783 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 EPB41L4BQ9H329 900 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 RIC8BQ9NVN3 520 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 SIRT5Q9NXA8 310 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 ATP8A1Q9Y2Q0 1164 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 CC2D2AQ9P2K1 1620 aa8.27□□□□□ -1.09
VPS26B-205ENST00000530402 LRRC10BA6NIK2 292 aa8.26□□□□□ -1.09
VPS26B-205ENST00000530402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.26□□□□□ -1.09
VPS26B-205ENST00000530402 VIPR1P32241 457 aa8.26□□□□□ -1.09
VPS26B-205ENST00000530402 ZNF200P98182 395 aaPredicted RBP8.26□□□□□ -1.09
VPS26B-205ENST00000530402 ZNF174Q15697 407 aa8.26□□□□□ -1.09
VPS26B-205ENST00000530402 MLANAQ16655 118 aa8.26□□□□□ -1.09
VPS26B-205ENST00000530402 BTBD8Q5XKL5 378 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms